Detailed information NTG0149217

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: ABU16_RS21175
• Genome accession: NZ_CP011882
• Coordinates: 4066238..4066882 (-)
• Length: 214 a.a.
• NCBI ID: WP_003220716.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain TO-A JPC
• Function: promoting transcription of comS (predicted from homology) Competence regulation

Genomic Context

Location: 4061238..4071882

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABU16_RS21140 (ABU16_4198)	mrpB	4062430..4062861 (+)	432	WP_003228819.1	Na(+)/H(+) antiporter subunit B	-
ABU16_RS21145 (ABU16_4199)	mrpC	4062861..4063202 (+)	342	WP_003220730.1	Na(+)/H(+) antiporter subunit C	-
ABU16_RS21150 (ABU16_4200)	mrpD	4063195..4064676 (+)	1482	WP_003228817.1	Na+/H+ antiporter subunit D	-
ABU16_RS21155 (ABU16_4201)	mrpE	4064682..4065158 (+)	477	WP_003228815.1	Na+/H+ antiporter subunit E	-
ABU16_RS21160 (ABU16_4202)	mrpF	4065158..4065442 (+)	285	WP_003228814.1	Na(+)/H(+) antiporter subunit F1	-
ABU16_RS21165 (ABU16_4203)	mnhG	4065426..4065800 (+)	375	WP_003228812.1	monovalent cation/H(+) antiporter subunit G	-
ABU16_RS21170 (ABU16_4204)	yuxO	4065839..4066219 (-)	381	WP_003228810.1	hotdog fold thioesterase	-
ABU16_RS21175 (ABU16_4205)	comA	4066238..4066882 (-)	645	WP_003220716.1	two-component system response regulator ComA	Regulator
ABU16_RS21180 (ABU16_4206)	-	4066963..4069260 (-)	2298	Protein_4116	histidine kinase	-
ABU16_RS21185 (ABU16_4208)	comX	4069268..4069429 (-)	162	WP_003228803.1	competence pheromone ComX	-
ABU16_RS21190 (ABU16_4209)	-	4069444..4070304 (-)	861	WP_029318489.1	polyprenyl synthetase family protein	-
ABU16_RS21195 (ABU16_4210)	degQ	4070489..4070629 (-)	141	WP_003220708.1	degradation enzyme regulation protein DegQ	Regulator
ABU16_RS22635 (ABU16_4211)	-	4070851..4070976 (+)	126	WP_003228793.1	hypothetical protein	-
ABU16_RS21200 (ABU16_4212)	-	4071090..4071458 (+)	369	WP_014477834.1	hypothetical protein	-

Sequence

Protein

• Length: 214 a.a.
• Molecular weight: 24128.51 Da
• Isoelectric Point: 4.6857

>NTDB_id=149217 ABU16_RS21175 WP_003220716.1 4066238..4066882(-) (comA) [Bacillus subtilis strain TO-A JPC]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide

• Length: 645 bp

>NTDB_id=149217 ABU16_RS21175 WP_003220716.1 4066238..4066882(-) (comA) [Bacillus subtilis strain TO-A JPC]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCGAGCGAACAGTTTATCAAGCAGCATGATTTCTCGTCATATGATCTCATTTTAA
TGGATCTGAATCTAGGCGGCGAGGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTGTATACCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCTAGAGAATGCCTG
ATTCTTCAAGAAGTTGAAAAGGGATTTACAAACCAAGAAATCGCAGATGCCCTTCATTTAAGCAAGCGGTCCATTGAATA
CAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGTTCACGGACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, luxR family (GerE) (152-208)

• Response regulator receiver domain (Response_reg) (4-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Bacillus subtilis subsp. subtilis str. 168	100	100	1