Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ABU16_RS07040 Genome accession   NZ_CP011882
Coordinates   1385003..1385953 (+) Length   316 a.a.
NCBI ID   WP_003234491.1    Uniprot ID   A0AAE2SHG3
Organism   Bacillus subtilis strain TO-A JPC     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1380003..1390953
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABU16_RS07015 (ABU16_1381) rapC 1381462..1382610 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  ABU16_RS07020 (ABU16_1382) phrC 1382594..1382716 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  ABU16_RS21565 (ABU16_1383) yczM 1382816..1382905 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  ABU16_RS21570 (ABU16_1384) yczN 1382987..1383100 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  ABU16_RS07035 (ABU16_1385) thrD 1383254..1384618 (-) 1365 WP_003234493.1 aspartate kinase -
  ABU16_RS07040 (ABU16_1386) ceuB 1385003..1385953 (+) 951 WP_003234491.1 petrobactin ABC transporter permease YclN Machinery gene
  ABU16_RS07045 (ABU16_1387) yclO 1385946..1386893 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  ABU16_RS07050 (ABU16_1388) yclP 1386887..1387645 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  ABU16_RS07055 (ABU16_1389) yclQ 1387667..1388620 (+) 954 WP_003234484.1 petrobactin ABC transporter substrate-binding protein YclQ -
  ABU16_RS07060 (ABU16_1390) ycnB 1388667..1390085 (-) 1419 WP_003234482.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34899.33 Da        Isoelectric Point: 9.9364

>NTDB_id=149163 ABU16_RS07040 WP_003234491.1 1385003..1385953(+) (ceuB) [Bacillus subtilis strain TO-A JPC]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTVLLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=149163 ABU16_RS07040 WP_003234491.1 1385003..1385953(+) (ceuB) [Bacillus subtilis strain TO-A JPC]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TTGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGTGCTGTTGGGAGCGGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522

Multiple sequence alignment