Detailed information NTG0149089

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: AB406_RS03580
• Genome accession: NZ_CP011859
• Coordinates: 725625..726728 (-)
• Length: 367 a.a.
• NCBI ID: WP_079206963.1
• Uniprot ID: A0A1S7DRE1
• Organism: Riemerella anatipestifer strain HXb2
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 720625..731728

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB406_RS12025 (AB406_0719)	-	721591..721731 (+)	141	WP_185114029.1	hypothetical protein	-
AB406_RS03555 (AB406_0720)	comF	721819..722472 (-)	654	WP_079206959.1	ComF family protein	Machinery gene
AB406_RS03565 (AB406_0721)	-	722698..723249 (-)	552	WP_014938008.1	hypothetical protein	-
AB406_RS03570 (AB406_0722)	-	723301..723951 (-)	651	WP_079206961.1	HD domain-containing protein	-
AB406_RS03575 (AB406_0723)	gdhA	724083..725441 (-)	1359	WP_014938006.1	NADP-specific glutamate dehydrogenase	-
AB406_RS03580 (AB406_0724)	dprA	725625..726728 (-)	1104	WP_079206963.1	DNA-processing protein DprA	Machinery gene
AB406_RS03585 (AB406_0725)	-	726731..727108 (-)	378	WP_014938004.1	group III truncated hemoglobin	-
AB406_RS03590 (AB406_0726)	ruvC	727119..727673 (-)	555	WP_004918088.1	crossover junction endodeoxyribonuclease RuvC	-
AB406_RS12155 (AB406_0727)	-	727697..728470 (-)	774	WP_260311103.1	hypothetical protein	-
AB406_RS12160	-	728457..728888 (-)	432	WP_252563169.1	carboxypeptidase-like regulatory domain-containing protein	-
AB406_RS03600 (AB406_0729)	-	728918..729391 (-)	474	WP_004918092.1	Lrp/AsnC family transcriptional regulator	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40277.20 Da
• Isoelectric Point: 6.9058

>NTDB_id=149089 AB406_RS03580 WP_079206963.1 725625..726728(-) (dprA) [Riemerella anatipestifer strain HXb2]
MVNAEEILYSIALRRSPLVGDVTFANLVGEVGSAKEVWSLSQSELRKISGIGKQIASSIGDKNLLKLAEKEIEFCIKNEI
KIHLRHLNQLPRLLGECYDAPAILFQKGDYDDTANNISIVGTRNATAYGKSFLEDLIVQFKDKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIIYPSKHKILAEEILNNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPSVEVSLTPIQKPIYDA
IKGGNDISLDDLSEKLNQPISKVFPVLLELELLGLIRANSGRKYSVI

Nucleotide

• Length: 1104 bp

>NTDB_id=149089 AB406_RS03580 WP_079206963.1 725625..726728(-) (dprA) [Riemerella anatipestifer strain HXb2]
ATGGTAAATGCAGAAGAAATTTTATATTCTATTGCTTTACGGCGAAGTCCATTGGTGGGAGATGTTACATTTGCAAATTT
AGTGGGCGAAGTTGGTTCTGCTAAGGAGGTTTGGAGTTTGTCTCAATCGGAACTAAGAAAAATATCGGGGATAGGTAAAC
AAATAGCCTCAAGTATTGGAGATAAGAATCTTTTAAAACTTGCCGAAAAGGAAATTGAGTTCTGCATTAAAAATGAGATA
AAAATCCACTTACGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCTGCTATTCTTTTTCAAAA
AGGAGATTATGACGATACCGCTAATAATATTAGTATCGTTGGGACGAGAAATGCTACTGCTTACGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAGATAAAAATATTCAAGTCATTAGTGGTTTAGCTTTAGGTACAGACGGAATAGCTCAT
CAAGAGGCTTTAAAAAACAATATAAAAACTTCAGCGGTTTTAGCACACGGTTTACATATCATTTATCCGTCCAAACATAA
AATTCTCGCTGAAGAAATATTAAATAATGGTGGAGCTTTGTTTTCTGAATTCTGCTCTGATGAAAAGCCAGATAGAGAAC
ATTTTTTGCAAAGAAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCAGGAGGTTCT
ATTAGTACGGCGAGTTTTGCTAATCAGTATAATAGAGAGGTGTACGCTTTGGCAGGGCGTCTTACGGATAAGTATAGCCA
AGGTTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTCGGTTGAGGTTTCTTTAACTCCTATTCAGAAGCCTATTTATGATGCT
ATTAAAGGAGGTAATGATATTTCTTTAGATGACTTGTCAGAAAAATTAAATCAACCCATTTCTAAAGTGTTTCCAGTTTT
GTTAGAATTAGAATTATTGGGGTTGATAAGAGCAAATTCTGGGAGGAAATATTCTGTCATTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

• DprA winged helix domain (DprA_WH) (307-361)

3D structure

• AlphaFold DB: A0A1S7DRE1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	94.55	100	0.946