Detailed information NTG0149026

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: AB691_RS13795
• Genome accession: NZ_CP011854
• Coordinates: 3003807..3006032 (-)
• Length: 741 a.a.
• NCBI ID: WP_080965156.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain SLG510A3-8
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2998807..3011032

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB691_RS13760 (AB691_2850)	murB	2999197..3000216 (-)	1020	WP_048329521.1	UDP-N-acetylmuramate dehydrogenase	-
AB691_RS13765 (AB691_2851)	-	3000213..3000680 (-)	468	WP_014597103.1	low molecular weight protein-tyrosine-phosphatase	-
AB691_RS13770 (AB691_2852)	kdsB	3000682..3001446 (-)	765	WP_048329522.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
AB691_RS13775 (AB691_2853)	-	3001443..3001628 (-)	186	WP_011913743.1	Trm112 family protein	-
AB691_RS13780 (AB691_2854)	lpxK	3001674..3002678 (-)	1005	WP_013983258.1	tetraacyldisaccharide 4'-kinase	-
AB691_RS13785 (AB691_2855)	-	3002678..3003106 (-)	429	WP_013983259.1	ExbD/TolR family protein	-
AB691_RS13790 (AB691_2856)	-	3003103..3003735 (-)	633	WP_013983260.1	MotA/TolQ/ExbB proton channel family protein	-
AB691_RS13795 (AB691_2857)	comA	3003807..3006032 (-)	2226	WP_080965156.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AB691_RS13800 (AB691_2858)	-	3006177..3006692 (+)	516	WP_011913748.1	DUF2062 domain-containing protein	-
AB691_RS13805 (AB691_2859)	-	3006705..3007949 (-)	1245	WP_048330515.1	lipoprotein-releasing ABC transporter permease subunit	-
AB691_RS13810 (AB691_2860)	lolD	3007949..3008647 (-)	699	WP_013983263.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
AB691_RS13815 (AB691_2861)	-	3008655..3009902 (-)	1248	WP_041771782.1	lipoprotein-releasing ABC transporter permease subunit	-
AB691_RS13820 (AB691_2862)	-	3009935..3010570 (+)	636	WP_011913752.1	PilZ domain-containing protein	-
AB691_RS13825 (AB691_2863)	-	3010574..3010882 (+)	309	WP_048329523.1	hypothetical protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80929.51 Da
• Isoelectric Point: 10.2466

>NTDB_id=149026 AB691_RS13795 WP_080965156.1 3003807..3006032(-) (comA) [Stutzerimonas stutzeri strain SLG510A3-8]
MRTWMLALAAGLVLPRFLPALPAQWFCAALAAVGLLLLLRHRWVAPGLFLLGLSWACYQSQSAIDDRLPASMDGRTFWIE
GRVVGLPSRIGNVVRFELDDIQSRHAGLPSKVRLSWYDGPQLQAGERWRLAARLKRPHGMVNPHAFDYEAWLLARRIGAT
GTIKAGERLTASAASDGWRDQLRARLMAVPASDRQGAIAALVVGDDSGLSRGDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALLARLGAWPRRLPWLPWACGLALSGALAYGWLAGFDVPVRRACLMVTVVLVWRLRFRHLGVWLPLLLALDGVLLI
DPLVTLQPGFWLSFGAVAVLALAFSGRLGSWRWWMALTRAQWAATLGLLPLLLALGLPVSASGPLANLLAVPWVSLTVPF
ALLGTLLLPLAGVGEALLSVVGYSLALLFDVLAAIANWQPAWIAVGLPVWALALIGLGVLLLLLPAGIPLRSLGLLLLLP
LAFPPRVEVPDGRAQVWVLDVGQGLAVLVRTREHALLYDAGPKQGDFDTGERVVVPSLRTLGVTRLDLLLLSHADNDHSG
GADAVQRLLRVDRVVSGEPSRLAPDLGAERCESGSSWQWNDVRFSLWQWQMARDSNQQSCVLQIEANGERILLTGDIDQA
AERAWLASGQRTPSHWLLLPHHGSRSSSSEPFLRGVASHAALISRSLHNAFGHPHPSVVERLEILDIRAYDTALHGAIRI
ELGSFSPPRLQRSQRRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=149026 AB691_RS13795 WP_080965156.1 3003807..3006032(-) (comA) [Stutzerimonas stutzeri strain SLG510A3-8]
ATGCGCACATGGATGCTTGCGCTCGCCGCGGGTCTGGTCCTGCCACGCTTCCTTCCTGCCTTGCCCGCGCAGTGGTTCTG
TGCGGCGCTGGCGGCTGTCGGACTGCTGCTCCTGCTGCGTCACCGCTGGGTGGCGCCGGGCTTGTTTCTGCTGGGCTTGA
GCTGGGCCTGCTACCAGAGCCAGAGCGCCATCGACGACCGCTTACCGGCGTCCATGGACGGTCGCACCTTTTGGATCGAG
GGGCGGGTAGTGGGGTTGCCCAGTCGTATCGGCAATGTGGTGCGCTTCGAGCTCGACGACATCCAATCGCGGCATGCCGG
GTTGCCATCGAAGGTGCGGCTGTCCTGGTATGACGGTCCGCAGCTACAAGCCGGCGAGCGCTGGCGCCTGGCGGCGCGAC
TGAAGCGACCGCATGGCATGGTCAATCCCCACGCCTTCGATTACGAAGCCTGGTTGCTGGCGCGACGCATCGGCGCCACG
GGCACGATAAAGGCGGGCGAGCGCCTGACGGCGTCGGCGGCAAGCGACGGATGGCGCGATCAGCTTCGGGCGCGGCTCAT
GGCCGTTCCGGCATCCGATCGGCAGGGCGCCATCGCGGCACTGGTGGTGGGTGACGATTCCGGTTTGAGCCGCGGCGACT
GGCAGGTGTTGCAGGACACCGGCACCGTCCACCTGATGGTCATCTCCGGACAGCACATCGGCATGCTGGCGGGGCTGCTC
TATGGTCTGGTCGCATTGCTGGCTCGCCTGGGTGCGTGGCCGCGGCGGTTGCCCTGGTTGCCCTGGGCGTGCGGGCTGGC
GTTAAGCGGTGCGCTGGCCTATGGCTGGCTGGCCGGTTTCGATGTGCCGGTGCGTCGTGCCTGCCTGATGGTGACGGTGG
TGCTTGTCTGGCGATTGCGCTTTCGCCATCTGGGTGTCTGGTTGCCGCTGCTGCTGGCGCTCGATGGCGTCCTGCTGATC
GATCCTCTGGTGACATTGCAGCCCGGGTTCTGGCTGTCGTTTGGAGCGGTGGCGGTTCTGGCATTGGCGTTCTCGGGGCG
GCTCGGCTCATGGCGCTGGTGGATGGCCCTGACCCGGGCGCAGTGGGCGGCCACCCTTGGTCTGCTTCCGCTGTTGCTGG
CCCTCGGATTGCCGGTAAGTGCGAGCGGGCCGCTGGCCAATCTGCTTGCCGTACCCTGGGTGAGTCTGACCGTGCCCTTT
GCGTTGCTCGGTACGCTCCTGCTGCCCTTGGCCGGGGTTGGCGAAGCGCTGCTGTCGGTGGTGGGCTATTCGCTGGCATT
GCTGTTCGACGTCCTGGCGGCGATAGCCAATTGGCAACCCGCCTGGATTGCGGTCGGCCTGCCCGTCTGGGCGCTGGCGT
TAATCGGGCTGGGCGTCCTGTTGCTGTTGCTGCCAGCGGGTATTCCGCTGCGTTCGCTGGGTTTGCTGCTGCTATTGCCG
CTGGCGTTCCCGCCTCGTGTGGAGGTGCCAGACGGCCGGGCGCAGGTCTGGGTATTGGATGTAGGGCAGGGCCTGGCGGT
GCTTGTACGCACTCGCGAGCATGCACTGCTCTACGATGCCGGGCCGAAGCAGGGCGACTTCGATACGGGCGAGCGGGTGG
TCGTCCCTTCGCTCCGGACCCTTGGCGTTACTCGGTTGGACCTGCTGTTGCTGAGTCATGCCGATAATGATCATTCGGGC
GGTGCGGACGCGGTTCAGCGGTTGCTGAGGGTTGATCGGGTGGTCAGTGGCGAGCCGTCGCGCCTTGCGCCTGATCTGGG
CGCCGAACGTTGCGAAAGCGGTAGCAGCTGGCAGTGGAACGATGTGCGCTTCAGTCTGTGGCAATGGCAGATGGCACGCG
ACAGCAATCAGCAGTCCTGCGTGCTGCAAATCGAGGCCAATGGTGAGCGGATCCTGCTCACCGGCGACATCGACCAGGCC
GCGGAGCGGGCATGGCTGGCAAGCGGACAGCGCACCCCATCGCACTGGCTGTTGCTGCCCCACCATGGCAGCCGCAGCTC
GTCGTCAGAACCGTTTCTGCGCGGCGTCGCCTCCCATGCCGCGCTGATCTCGCGCAGCCTGCACAATGCCTTCGGACACC
CACACCCAAGCGTGGTCGAGCGGCTCGAGATCCTCGATATCCGGGCCTACGACACCGCCTTGCATGGCGCAATCCGCATC
GAGCTGGGAAGCTTTTCGCCTCCTCGGCTACAACGTTCGCAGCGACGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

• Competence protein (Competence) (201-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-674)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	67.367	96.356	0.649
comA	Ralstonia pseudosolanacearum GMI1000	36.761	100	0.386