Detailed information NTG0148737

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: REIFOR_RS02105
• Genome accession: NZ_CP011797
• Coordinates: 436083..437450 (-)
• Length: 455 a.a.
• NCBI ID: WP_100255990.1
• Uniprot ID: A0A2K8KRR7
• Organism: Reinekea forsetii strain Hel1_31_D35
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 431083..442450

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
REIFOR_RS02090 (REIFOR_00418)	-	434521..434877 (+)	357	WP_100255987.1	hypothetical protein	-
REIFOR_RS02095 (REIFOR_00419)	-	434938..435396 (+)	459	WP_100255988.1	type IV pilin protein	-
REIFOR_RS02100 (REIFOR_00420)	-	435406..435996 (-)	591	WP_145980210.1	GspH/FimT family protein	-
REIFOR_RS02105 (REIFOR_00421)	pilR	436083..437450 (-)	1368	WP_100255990.1	sigma-54 dependent transcriptional regulator	Regulator
REIFOR_RS02110 (REIFOR_00422)	-	437479..439068 (-)	1590	WP_100255991.1	PAS domain-containing sensor histidine kinase	-
REIFOR_RS02115 (REIFOR_00423)	-	439195..440817 (+)	1623	WP_100255992.1	NAD+ synthase	-
REIFOR_RS02120 (REIFOR_00424)	-	440823..441482 (+)	660	WP_100255993.1	HAD family hydrolase	-
REIFOR_RS02125 (REIFOR_00425)	-	441538..442377 (-)	840	WP_158524268.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 455 a.a.
• Molecular weight: 50074.76 Da
• Isoelectric Point: 5.3855

>NTDB_id=148737 REIFOR_RS02105 WP_100255990.1 436083..437450(-) (pilR) [Reinekea forsetii strain Hel1_31_D35]
MPTAQCVLIIDDEPDIRELLEITLMRMGIASCSAVDVSSAIMAIKQQEVDLILTDMRLPDGNGLDIVRYVAETKPDTPIA
VITAHGNMDLAIESLKSGAFDFVSKPLDVNKLRNLITQALKVKPPTGHQLDTGMHAKALDMGQSAAMQLLQKKIRKLAVS
QAPVFIQGESGSGKELAARQIHTLGPRALGPFIAVNCGAIPSELMESEFFGHKRGAFTGATEDKQGFFQAAQAGTLFLDE
VADLPLAMQVKLLRAIQEKKIRPIGTQNELDVDVRILSATHKNLDAMVEAGEFRQDLFYRINVIALTIPALRERTDDIPL
LSQQILQRIAGNYELPMARLTAEAKKELHLYSFPGNVRELENILERAFALCEDDTIGAADLNLNSRYNAEPSPNEPAALA
ARADGVSLEDYLMDIERNVVEQALEATRWNRTAAAKRLGITFRALRYRLKKLGLE

Nucleotide

• Length: 1368 bp

>NTDB_id=148737 REIFOR_RS02105 WP_100255990.1 436083..437450(-) (pilR) [Reinekea forsetii strain Hel1_31_D35]
ATGCCAACCGCCCAATGTGTGTTAATTATCGACGATGAACCGGATATCCGCGAGTTGCTCGAAATCACCCTAATGCGCAT
GGGTATCGCAAGCTGCAGCGCGGTCGATGTCTCGTCGGCCATTATGGCCATCAAACAACAGGAGGTGGATTTAATCCTCA
CCGATATGCGCCTGCCCGATGGCAATGGCCTGGATATAGTGCGTTACGTTGCCGAGACCAAACCCGACACCCCGATAGCG
GTCATTACCGCGCACGGCAATATGGATCTGGCCATCGAGTCACTGAAATCCGGGGCCTTTGATTTCGTGTCCAAACCACT
CGATGTCAATAAACTGCGCAACCTCATCACCCAGGCACTGAAGGTAAAGCCTCCGACGGGCCATCAACTCGACACCGGTA
TGCATGCCAAAGCCCTAGACATGGGCCAATCCGCGGCCATGCAACTGCTACAGAAAAAAATTCGCAAACTGGCGGTCAGT
CAAGCGCCGGTCTTTATTCAGGGTGAGTCCGGATCGGGCAAGGAGCTGGCCGCGCGTCAGATTCATACCCTCGGTCCGCG
TGCGCTGGGACCCTTTATCGCGGTGAACTGCGGTGCGATCCCCTCTGAATTAATGGAGAGTGAATTTTTCGGTCACAAGC
GGGGGGCCTTTACCGGGGCAACGGAAGATAAGCAGGGATTTTTTCAAGCCGCCCAAGCTGGCACCCTATTTCTCGATGAG
GTCGCCGATTTGCCATTGGCCATGCAGGTCAAACTGTTACGGGCGATACAGGAGAAAAAAATTCGGCCAATCGGCACTCA
AAATGAGCTCGATGTCGATGTCCGAATTCTCAGTGCAACGCACAAAAATCTCGACGCCATGGTCGAAGCAGGCGAGTTTC
GCCAGGATTTGTTTTATCGCATCAATGTGATTGCCTTAACGATTCCGGCGCTGCGTGAACGTACCGATGACATCCCCTTG
TTGAGTCAACAAATACTCCAGCGTATTGCCGGCAACTATGAACTGCCGATGGCCCGGCTAACCGCTGAGGCGAAAAAAGA
ACTCCATCTGTATAGCTTCCCCGGCAATGTTCGCGAGCTGGAAAACATCCTCGAACGGGCTTTTGCTCTGTGTGAGGACG
ACACCATCGGCGCCGCCGATCTAAATTTGAACAGCCGTTATAATGCCGAGCCATCGCCTAATGAGCCTGCGGCATTGGCG
GCTCGAGCGGACGGCGTGTCGCTGGAAGACTACCTTATGGATATAGAACGCAATGTCGTCGAGCAGGCCTTGGAAGCAAC
CCGATGGAACCGCACCGCGGCGGCAAAGCGCTTAGGCATTACCTTTAGAGCATTGCGGTATCGACTGAAAAAACTCGGCT
TGGAATAG

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (414-452)

• Response regulator receiver domain (Response_reg) (7-116)

• Sigma-54 interaction domain (Sigma54_activat) (142-306)

3D structure

• AlphaFold DB: A0A2K8KRR7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	60.44	100	0.604
pilR	Acinetobacter baumannii strain A118	50.214	100	0.516