Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   AYR70_RS17400 Genome accession   NZ_CP014541
Coordinates   3666816..3667451 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain XH856     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3661816..3672451
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AYR70_RS17380 (AYR70_17380) - 3661893..3662708 (+) 816 WP_005120616.1 DsbC family protein -
  AYR70_RS17385 (AYR70_17385) - 3662953..3664254 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  AYR70_RS17390 (AYR70_17390) thrC 3664310..3665449 (+) 1140 WP_000063593.1 threonine synthase -
  AYR70_RS17395 (AYR70_17395) pbpG 3665557..3666603 (-) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  AYR70_RS17400 (AYR70_17400) letA 3666816..3667451 (+) 636 WP_000633799.1 response regulator Regulator
  AYR70_RS17405 (AYR70_17405) pilS 3667462..3669030 (+) 1569 WP_001160343.1 sensor histidine kinase Regulator
  AYR70_RS17410 (AYR70_17410) - 3669055..3670476 (+) 1422 WP_031964799.1 sigma-54-dependent transcriptional regulator -
  AYR70_RS17415 (AYR70_17415) - 3670480..3671664 (-) 1185 WP_000939107.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=148567 AYR70_RS17400 WP_000633799.1 3666816..3667451(+) (letA) [Acinetobacter baumannii strain XH856]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=148567 AYR70_RS17400 WP_000633799.1 3666816..3667451(+) (letA) [Acinetobacter baumannii strain XH856]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAATATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCATTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGTGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55