Detailed information NTG0147483

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ABH13_RS16910
• Genome accession: NZ_CP011686
• Coordinates: 3468916..3470079 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain G341
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3463916..3475079

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABH13_RS16880 (ABH13_3419)	-	3464180..3464599 (-)	420	WP_025285352.1	TIGR03826 family flagellar region protein	-
ABH13_RS16885 (ABH13_3420)	comFC	3464673..3465362 (-)	690	WP_198314908.1	phosphoribosyltransferase family protein	Machinery gene
ABH13_RS16890 (ABH13_3421)	-	3465368..3465652 (-)	285	WP_007407481.1	late competence development ComFB family protein	-
ABH13_RS16895 (ABH13_3422)	comFA	3465710..3467095 (-)	1386	WP_047936252.1	DEAD/DEAH box helicase	Machinery gene
ABH13_RS16900 (ABH13_3423)	-	3467204..3468052 (-)	849	WP_007407483.1	DegV family protein	-
ABH13_RS16905 (ABH13_3424)	degU	3468150..3468839 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ABH13_RS16910 (ABH13_3425)	degS	3468916..3470079 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
ABH13_RS16915 (ABH13_3426)	-	3470302..3470949 (+)	648	WP_007407485.1	YigZ family protein	-
ABH13_RS16920 (ABH13_3427)	-	3470954..3472252 (+)	1299	WP_047936253.1	LCP family protein	-
ABH13_RS16925 (ABH13_3428)	-	3472351..3473427 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
ABH13_RS16930 (ABH13_3429)	tuaH	3473560..3474756 (-)	1197	WP_047936254.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=147483 ABH13_RS16910 WP_007407484.1 3468916..3470079(-) (degS) [Bacillus velezensis strain G341]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=147483 ABH13_RS16910 WP_007407484.1 3468916..3470079(-) (degS) [Bacillus velezensis strain G341]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCTTTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTGATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
ATCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951