Detailed information
Bioinformatically predicted
Overview
| Name | pilD | Type | Machinery gene |
| Locus tag | ASU2_RS05080 | Genome accession | NC_018690 |
| Coordinates | 1114637..1115311 (-) | Length | 224 a.a. |
| NCBI ID | WP_014991732.1 | Uniprot ID | K0G643 |
| Organism | Actinobacillus suis H91-0380 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1109637..1120311
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ASU2_RS05060 (ASU2_05010) | lptE | 1112103..1112597 (+) | 495 | WP_005597385.1 | LPS assembly lipoprotein LptE | - |
| ASU2_RS05065 (ASU2_05015) | holA | 1112705..1113730 (+) | 1026 | WP_014991730.1 | DNA polymerase III subunit delta | - |
| ASU2_RS05070 (ASU2_05020) | yacG | 1113807..1113995 (-) | 189 | WP_005623139.1 | DNA gyrase inhibitor YacG | - |
| ASU2_RS05075 (ASU2_05025) | coaE | 1113977..1114615 (-) | 639 | WP_014991731.1 | dephospho-CoA kinase | - |
| ASU2_RS05080 (ASU2_05030) | pilD | 1114637..1115311 (-) | 675 | WP_014991732.1 | fimbrial protein | Machinery gene |
| ASU2_RS05085 (ASU2_05035) | pilC | 1115311..1116504 (-) | 1194 | WP_014991733.1 | type II secretion system F family protein | Machinery gene |
| ASU2_RS05090 (ASU2_05040) | pilB | 1116497..1117882 (-) | 1386 | WP_014991734.1 | GspE/PulE family protein | Machinery gene |
| ASU2_RS05095 (ASU2_05045) | pilA | 1117903..1118340 (-) | 438 | WP_014991735.1 | pilin | Machinery gene |
| ASU2_RS05100 (ASU2_05050) | radA | 1118520..1119899 (+) | 1380 | WP_014991736.1 | DNA repair protein RadA | Machinery gene |
Sequence
Protein
Download Length: 224 a.a. Molecular weight: 26097.15 Da Isoelectric Point: 7.3196
>NTDB_id=1470 ASU2_RS05080 WP_014991732.1 1114637..1115311(-) (pilD) [Actinobacillus suis H91-0380]
MEAVEFNQFFATLIAFLFAFWCKRAIKLFANHINQQVYQEYSSLLPPIHSYDYFSQHSKLQPKQSYLANFFFWAFPLLTF
HIPSMTLAFLLMILLFLSVLDSCYYLTDIRYVIAIFVLALVYEPMAAHIETLLGCILFFTCLHYGILWFWKKEAFGIGDS
LVISSISPLFNIDDMLKLILLACVSGCIYYFGYQAIMKRTLVKLPFIPFISFSTFVLIIDKIYA
MEAVEFNQFFATLIAFLFAFWCKRAIKLFANHINQQVYQEYSSLLPPIHSYDYFSQHSKLQPKQSYLANFFFWAFPLLTF
HIPSMTLAFLLMILLFLSVLDSCYYLTDIRYVIAIFVLALVYEPMAAHIETLLGCILFFTCLHYGILWFWKKEAFGIGDS
LVISSISPLFNIDDMLKLILLACVSGCIYYFGYQAIMKRTLVKLPFIPFISFSTFVLIIDKIYA
Nucleotide
Download Length: 675 bp
>NTDB_id=1470 ASU2_RS05080 WP_014991732.1 1114637..1115311(-) (pilD) [Actinobacillus suis H91-0380]
ATGGAAGCGGTTGAATTTAATCAATTTTTTGCGACACTAATAGCATTTTTATTTGCATTTTGGTGTAAACGAGCCATCAA
GTTATTTGCTAATCATATTAATCAACAAGTATATCAAGAATACAGTAGCTTATTGCCTCCTATACATAGTTATGACTATT
TTAGTCAGCATTCAAAATTACAACCCAAACAAAGCTATTTGGCTAATTTTTTCTTCTGGGCTTTTCCATTACTTACATTT
CATATTCCCTCAATGACACTCGCATTTTTATTGATGATTTTGCTGTTTTTGAGTGTGTTGGATTCTTGTTACTATTTAAC
GGATATTCGTTATGTTATTGCGATATTCGTTTTGGCTCTGGTCTATGAACCAATGGCTGCACATATAGAAACCTTATTGG
GTTGTATATTATTTTTTACCTGCCTTCATTACGGAATTTTGTGGTTCTGGAAGAAAGAGGCATTTGGTATAGGTGATAGC
TTAGTGATTAGCTCAATTTCGCCTTTGTTTAACATTGACGATATGTTGAAATTAATCTTACTGGCTTGTGTTTCAGGTTG
TATTTATTATTTCGGCTATCAAGCCATAATGAAGCGTACTTTAGTAAAATTGCCTTTTATTCCTTTTATTAGCTTTTCGA
CTTTCGTACTAATTATTGATAAAATTTATGCCTAA
ATGGAAGCGGTTGAATTTAATCAATTTTTTGCGACACTAATAGCATTTTTATTTGCATTTTGGTGTAAACGAGCCATCAA
GTTATTTGCTAATCATATTAATCAACAAGTATATCAAGAATACAGTAGCTTATTGCCTCCTATACATAGTTATGACTATT
TTAGTCAGCATTCAAAATTACAACCCAAACAAAGCTATTTGGCTAATTTTTTCTTCTGGGCTTTTCCATTACTTACATTT
CATATTCCCTCAATGACACTCGCATTTTTATTGATGATTTTGCTGTTTTTGAGTGTGTTGGATTCTTGTTACTATTTAAC
GGATATTCGTTATGTTATTGCGATATTCGTTTTGGCTCTGGTCTATGAACCAATGGCTGCACATATAGAAACCTTATTGG
GTTGTATATTATTTTTTACCTGCCTTCATTACGGAATTTTGTGGTTCTGGAAGAAAGAGGCATTTGGTATAGGTGATAGC
TTAGTGATTAGCTCAATTTCGCCTTTGTTTAACATTGACGATATGTTGAAATTAATCTTACTGGCTTGTGTTTCAGGTTG
TATTTATTATTTCGGCTATCAAGCCATAATGAAGCGTACTTTAGTAAAATTGCCTTTTATTCCTTTTATTAGCTTTTCGA
CTTTCGTACTAATTATTGATAAAATTTATGCCTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|