Detailed information NTG0146777

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ABA10_RS18780
• Genome accession: NZ_CP011534
• Coordinates: 3670013..3671158 (+)
• Length: 381 a.a.
• NCBI ID: WP_047183349.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain UD1022
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3665013..3676158

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABA10_RS18755 (ABA10_18755)	albF	3665031..3666311 (+)	1281	WP_015483836.1	pitrilysin family protein	-
ABA10_RS18760 (ABA10_18760)	albG	3666308..3667009 (+)	702	WP_015384931.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
ABA10_RS18765 (ABA10_18765)	ywhL	3667015..3668388 (-)	1374	WP_047183346.1	YncE family protein	-
ABA10_RS18770 (ABA10_18770)	ywhK	3668428..3669783 (-)	1356	WP_047183347.1	YncE family protein	-
ABA10_RS22225 (ABA10_18775)	-	3669780..3670010 (-)	231	WP_047183348.1	hypothetical protein	-
ABA10_RS18780 (ABA10_18780)	rapF	3670013..3671158 (+)	1146	WP_047183349.1	response regulator aspartate phosphatase RapF	Regulator
ABA10_RS18785 (ABA10_18785)	phrF	3671142..3671261 (+)	120	WP_041334633.1	phosphatase RapF inhibitor PhrF	Regulator
ABA10_RS18790 (ABA10_18790)	-	3671359..3671823 (+)	465	WP_047183350.1	YbaK/EbsC family protein	-
ABA10_RS18795 (ABA10_18795)	speB	3671860..3672732 (-)	873	WP_003227545.1	agmatinase	-
ABA10_RS18800 (ABA10_18800)	speE	3672793..3673623 (-)	831	WP_003227543.1	spermidine synthase	-
ABA10_RS18805 (ABA10_18805)	pbpG	3673825..3675900 (+)	2076	WP_047183351.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45689.15 Da
• Isoelectric Point: 5.0678

>NTDB_id=146777 ABA10_RS18780 WP_047183349.1 3670013..3671158(+) (rapF) [Bacillus subtilis strain UD1022]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDHMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAEDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=146777 ABA10_RS18780 WP_047183349.1 3670013..3671158(+) (rapF) [Bacillus subtilis strain UD1022]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTTAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCACATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTAATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGAAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.688	100	0.987
rapC	Bacillus subtilis subsp. subtilis str. 168	57.632	99.738	0.575