Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ABA10_RS02175 Genome accession   NZ_CP011534
Coordinates   424641..425591 (+) Length   316 a.a.
NCBI ID   WP_015382768.1    Uniprot ID   -
Organism   Bacillus subtilis strain UD1022     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 419641..430591
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABA10_RS02150 (ABA10_02150) rapC 421099..422247 (+) 1149 WP_015252823.1 response regulator aspartate phosphatase RapC Regulator
  ABA10_RS02155 (ABA10_02155) phrC 422231..422353 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  ABA10_RS20760 (ABA10_02160) yczM 422453..422542 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  ABA10_RS20765 (ABA10_02165) yczN 422626..422739 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  ABA10_RS02170 (ABA10_02170) thrD 422892..424256 (-) 1365 WP_047182090.1 aspartate kinase -
  ABA10_RS02175 (ABA10_02175) ceuB 424641..425591 (+) 951 WP_015382768.1 petrobactin ABC transporter permease YclN Machinery gene
  ABA10_RS02180 (ABA10_02180) yclO 425584..426531 (+) 948 WP_047182091.1 petrobactin ABC transporter permease YclO -
  ABA10_RS02185 (ABA10_02185) yclP 426525..427283 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  ABA10_RS02190 (ABA10_02190) yclQ 427305..428258 (+) 954 WP_047182092.1 petrobactin ABC transporter substrate-binding protein YclQ -
  ABA10_RS02195 (ABA10_02195) cdaE 428305..429723 (-) 1419 WP_014478836.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34885.30 Da        Isoelectric Point: 9.9364

>NTDB_id=146714 ABA10_RS02175 WP_015382768.1 424641..425591(+) (ceuB) [Bacillus subtilis strain UD1022]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLIAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=146714 ABA10_RS02175 WP_015382768.1 424641..425591(+) (ceuB) [Bacillus subtilis strain UD1022]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCCGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GATTGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACTATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGGGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

100

0.528

Multiple sequence alignment