Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | AA076_RS04210 | Genome accession | NZ_CP011526 |
| Coordinates | 849371..849814 (+) | Length | 147 a.a. |
| NCBI ID | WP_001099009.1 | Uniprot ID | A0A0C6EXF8 |
| Organism | Staphylococcus aureus strain DSM 20231 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 844371..854814
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AA076_RS04155 (AA076_04155) | - | 844854..845186 (-) | 333 | WP_001055143.1 | helix-turn-helix domain-containing protein | - |
| AA076_RS04160 (AA076_04160) | - | 845449..845643 (+) | 195 | WP_000108122.1 | helix-turn-helix transcriptional regulator | - |
| AA076_RS04165 (AA076_04165) | - | 845643..846410 (+) | 768 | WP_001002757.1 | phage antirepressor Ant | - |
| AA076_RS04170 (AA076_04170) | tscA | 846411..846635 (+) | 225 | WP_000187184.1 | type II toxin-antitoxin system antitoxin TscA | - |
| AA076_RS04175 (AA076_04175) | - | 846675..847124 (+) | 450 | WP_001836220.1 | hypothetical protein | - |
| AA076_RS04180 (AA076_04180) | - | 847138..847359 (+) | 222 | WP_000977381.1 | hypothetical protein | - |
| AA076_RS14635 (AA076_04185) | - | 847352..847513 (+) | 162 | WP_000066011.1 | DUF1270 domain-containing protein | - |
| AA076_RS04190 (AA076_04190) | - | 847607..847909 (+) | 303 | WP_000165363.1 | DUF2482 family protein | - |
| AA076_RS04195 (AA076_04195) | - | 847914..848174 (+) | 261 | WP_001836221.1 | DUF1108 family protein | - |
| AA076_RS04200 (AA076_04200) | - | 848187..848723 (+) | 537 | WP_001004336.1 | host-nuclease inhibitor Gam family protein | - |
| AA076_RS04205 (AA076_04205) | - | 848724..849374 (+) | 651 | WP_000840496.1 | ERF family protein | - |
| AA076_RS04210 (AA076_04210) | ssbA | 849371..849814 (+) | 444 | WP_001099009.1 | single-stranded DNA-binding protein | Machinery gene |
| AA076_RS04215 (AA076_04215) | - | 849826..850500 (+) | 675 | WP_000057263.1 | putative HNHc nuclease | - |
| AA076_RS16035 | - | 850497..850646 (+) | 150 | WP_001081076.1 | hypothetical protein | - |
| AA076_RS04220 (AA076_04220) | - | 850639..850920 (-) | 282 | WP_000414755.1 | hypothetical protein | - |
| AA076_RS04225 (AA076_04225) | - | 850986..851756 (+) | 771 | WP_001836222.1 | conserved phage C-terminal domain-containing protein | - |
| AA076_RS04230 (AA076_04230) | - | 851766..852545 (+) | 780 | WP_000803062.1 | ATP-binding protein | - |
| AA076_RS14640 (AA076_04235) | - | 852539..852697 (+) | 159 | WP_000256589.1 | hypothetical protein | - |
| AA076_RS04240 (AA076_04240) | - | 852710..852931 (+) | 222 | WP_001123695.1 | DUF3269 family protein | - |
| AA076_RS04245 (AA076_04245) | - | 852941..853345 (+) | 405 | WP_001836225.1 | DUF1064 domain-containing protein | - |
| AA076_RS04250 (AA076_04250) | - | 853350..853535 (+) | 186 | WP_001187243.1 | DUF3113 family protein | - |
| AA076_RS04255 (AA076_04255) | - | 853536..853841 (+) | 306 | WP_000101252.1 | hypothetical protein | - |
| AA076_RS04260 (AA076_04260) | - | 853969..854325 (+) | 357 | WP_000029376.1 | SA1788 family PVL leukocidin-associated protein | - |
| AA076_RS04265 (AA076_04265) | - | 854329..854571 (+) | 243 | WP_001562543.1 | SAV1978 family virulence-associated passenger protein | - |
Sequence
Protein
Download Length: 147 a.a. Molecular weight: 16321.89 Da Isoelectric Point: 5.8347
>NTDB_id=146592 AA076_RS04210 WP_001099009.1 849371..849814(+) (ssbA) [Staphylococcus aureus strain DSM 20231]
MNTVNLIGNLVADPELKGQNNNVVNFVIAVQRPFKNKQTNEYETDFIRCVAFGKTAEIIANNFNKGNKIGVTGSIQTGSY
ENNQGQKVFTTDIAVNNITFVERKNNGQSNNQQQHNSYNAPQNRQQSNNPFANANGPIEISDDDLPF
MNTVNLIGNLVADPELKGQNNNVVNFVIAVQRPFKNKQTNEYETDFIRCVAFGKTAEIIANNFNKGNKIGVTGSIQTGSY
ENNQGQKVFTTDIAVNNITFVERKNNGQSNNQQQHNSYNAPQNRQQSNNPFANANGPIEISDDDLPF
Nucleotide
Download Length: 444 bp
>NTDB_id=146592 AA076_RS04210 WP_001099009.1 849371..849814(+) (ssbA) [Staphylococcus aureus strain DSM 20231]
ATGAATACAGTAAATTTAATTGGGAACCTAGTGGCAGATCCAGAGTTAAAAGGTCAAAACAACAACGTAGTTAACTTTGT
AATCGCAGTACAGAGACCATTCAAAAACAAACAAACTAACGAATATGAAACAGACTTCATTCGTTGTGTTGCATTTGGTA
AGACTGCTGAAATCATCGCTAATAACTTTAATAAAGGTAATAAAATTGGCGTTACTGGTTCAATACAAACCGGTAGTTAT
GAAAATAATCAAGGACAGAAAGTGTTTACTACAGACATCGCAGTCAACAATATAACTTTCGTTGAACGTAAAAACAACGG
TCAATCTAACAACCAACAACAGCATAATTCATATAACGCACCACAGAATAGACAGCAATCAAATAATCCATTTGCTAATG
CTAATGGTCCTATAGAAATCTCTGACGATGATTTACCTTTCTAG
ATGAATACAGTAAATTTAATTGGGAACCTAGTGGCAGATCCAGAGTTAAAAGGTCAAAACAACAACGTAGTTAACTTTGT
AATCGCAGTACAGAGACCATTCAAAAACAAACAAACTAACGAATATGAAACAGACTTCATTCGTTGTGTTGCATTTGGTA
AGACTGCTGAAATCATCGCTAATAACTTTAATAAAGGTAATAAAATTGGCGTTACTGGTTCAATACAAACCGGTAGTTAT
GAAAATAATCAAGGACAGAAAGTGTTTACTACAGACATCGCAGTCAACAATATAACTTTCGTTGAACGTAAAAACAACGG
TCAATCTAACAACCAACAACAGCATAATTCATATAACGCACCACAGAATAGACAGCAATCAAATAATCCATTTGCTAATG
CTAATGGTCCTATAGAAATCTCTGACGATGATTTACCTTTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
41.279 |
100 |
0.483 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
38.235 |
100 |
0.442 |