Detailed information NTG0146308

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: AA974_RS06865
• Genome accession: NZ_CP011487
• Coordinates: 1408037..1409485 (+)
• Length: 482 a.a.
• NCBI ID: WP_064433928.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain PNG84A
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1403037..1414485

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AA974_RS06845 (AA974_06885)	glmS	1403681..1405474 (-)	1794	WP_064433926.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
AA974_RS06850 (AA974_06890)	-	1405475..1405714 (-)	240	WP_000461845.1	DUF2443 domain-containing protein	-
AA974_RS06855 (AA974_06895)	-	1405761..1406297 (-)	537	WP_064434090.1	purine-nucleoside phosphorylase	-
AA974_RS06860 (AA974_06900)	dnaA	1406450..1407817 (+)	1368	WP_064433927.1	chromosomal replication initiator protein DnaA	-
AA974_RS06865 (AA974_06905)	comH	1408037..1409485 (+)	1449	WP_064433928.1	hypothetical protein	Machinery gene
AA974_RS06875 (AA974_06915)	-	1409664..1410416 (+)	753	WP_064433929.1	exodeoxyribonuclease III	-
AA974_RS06880 (AA974_06920)	-	1410413..1411039 (-)	627	WP_064433930.1	outer membrane protein	-
AA974_RS06885 (AA974_06925)	-	1411048..1411407 (-)	360	WP_064433931.1	hypothetical protein	-
AA974_RS06890 (AA974_06930)	recG	1411489..1413357 (+)	1869	WP_064433932.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 482 a.a.
• Molecular weight: 55172.15 Da
• Isoelectric Point: 7.0430

>NTDB_id=146308 AA974_RS06865 WP_064433928.1 1408037..1409485(+) (comH) [Helicobacter pylori strain PNG84A]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPIDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKELHPHQMPSLNTPIQKPQNKPNSSQQSLQNFSYPESKLGSKNLKSSLLQPL
ATPGKTSPANEVKTPTNDTKPPLKHSSEDQENNLFIAPPTEKTLPNNTPNADINENNENSANNENRDNVEKQAVRDPNVK
EFACGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNHFTIL
QARSSTEKCKRARARKDGTIRQCYLIEEPLKQAWESEYQITTQLVKAVYERPKQDDQVEPTFYETSELSYSSTRKSEITH
NELNLNEKFMEFVEVYEGHYLNDIVKESNEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSKVVCVKKGNYLFN
EV

Nucleotide

• Length: 1449 bp

>NTDB_id=146308 AA974_RS06865 WP_064433928.1 1408037..1409485(+) (comH) [Helicobacter pylori strain PNG84A]
ATGAAAAAAACCCTCTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCATATATCCACTGCAATTGTCTATCAACCCATTGATGAA
AAACTTTCTTTAGAAACGACCCTAAACCCTAACCGCCCTACTATTCCCAGAAACACTCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTTGCACCCGCACCAAATGCCTTCTTTAAACACGCCCATACAAAAACCACAAAACAAGCCCAATTCATCGC
AACAATCTCTTCAAAATTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACCTTAAAAGTAGCCTTTTACAGCCTTTA
GCAACTCCTGGCAAAACAAGTCCCGCTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAGCGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
ACGAAAACAATGAAAATAGTGCAAACAACGAGAATAGGGATAATGTGGAAAAACAAGCCGTTAGAGATCCTAATGTTAAA
GAATTTGCATGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTACCGCCCGAGCATTTTAAAACGCGTTGATGA
AGACAAACAGACTGCGACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCT
ACACTAAAATCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACCATTTTACCATTCTC
CAAGCTAGAAGCTCTACAGAAAAATGCAAAAGGGCCAGAGCGCGAAAAGACGGCACGATTAGGCAATGCTATCTGATAGA
AGAGCCTTTAAAACAAGCATGGGAAAGTGAGTATCAAATCACCACACAATTAGTGAAAGCTGTATATGAACGCCCCAAAC
AAGACGATCAAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGTCTTATTCTTCCACACGAAAAAGCGAAATAACGCAT
AATGAATTGAATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGA
AAGCAACGAATACAAAGAATGGGTTAAAAACCATGTGCGGTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGC
AACCACGAGCCAAAAGCACGCCTTTGAGTATTGAAAATTCTAAAGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAAC
GAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	91.286	100	0.913