Detailed information NTG0146265

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: AA973_RS06655
• Genome accession: NZ_CP011485
• Coordinates: 1373609..1375042 (+)
• Length: 477 a.a.
• NCBI ID: WP_064438099.1
• Uniprot ID: A0A1A9HCN0
• Organism: Helicobacter pylori strain ausabrJ05
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1368609..1380042

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AA973_RS06635 (AA973_06680)	glmS	1369255..1371048 (-)	1794	WP_064438096.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
AA973_RS06640 (AA973_06685)	-	1371049..1371288 (-)	240	WP_000462049.1	DUF2443 domain-containing protein	-
AA973_RS06645 (AA973_06690)	-	1371324..1371866 (-)	543	WP_064438097.1	purine-nucleoside phosphorylase	-
AA973_RS06650 (AA973_06695)	dnaA	1372019..1373386 (+)	1368	WP_064438098.1	chromosomal replication initiator protein DnaA	-
AA973_RS06655 (AA973_06700)	comH	1373609..1375042 (+)	1434	WP_064438099.1	hypothetical protein	Machinery gene
AA973_RS06665 (AA973_06710)	-	1375222..1375974 (+)	753	WP_064438100.1	exodeoxyribonuclease III	-
AA973_RS06670 (AA973_06715)	-	1375971..1376606 (-)	636	WP_064438101.1	outer membrane protein	-
AA973_RS06675 (AA973_06720)	-	1376610..1376954 (-)	345	WP_064438102.1	hypothetical protein	-
AA973_RS06680 (AA973_06725)	recG	1377036..1378901 (+)	1866	WP_064438103.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 54612.55 Da
• Isoelectric Point: 7.0004

>NTDB_id=146265 AA973_RS06655 WP_064438099.1 1373609..1375042(+) (comH) [Helicobacter pylori strain ausabrJ05]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSSHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPKRPTIPRNTQIVFSSKELKEPHPQQIPSLNAPIQKPQNKPNSSQQSLQNFSYPESKLGSKNLKNSLLQPL
ATPSKISPTNEVKTPTNDTKPPLKHASEDQENNLFITPPTEKTLPNNSADINENNESNENKDNVEKQAVRDPNVKEFACG
KWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVHKTEPLEEPQTFEAKNNFALFQARSS
TEKCKRARARKDGTTRQCYLIEEPLKQAWESEYQITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNELNL
NEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSHVVCVKKGNYLFNEV

Nucleotide

• Length: 1434 bp

>NTDB_id=146265 AA973_RS06655 WP_064438099.1 1373609..1375042(+) (comH) [Helicobacter pylori strain ausabrJ05]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGTCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGGCAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCCTAAACCCTAAGCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCCGCACCCGCAACAAATACCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCAATTCATCGC
AACAATCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACCTTAAAAACAGCCTTTTACAGCCTTTA
GCAACTCCTAGCAAAATAAGCCCCACTAATGAAGTTAAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATGCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACAACAGCGCTGATATTAATGAAA
ACAATGAGAGCAATGAGAATAAGGATAATGTGGAAAAACAAGCCGTTAGAGATCCTAATGTTAAAGAATTTGCGTGCGGG
AAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACAGACTGC
AACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAATCTCTG
TTCATAAAACAGAGCCTTTAGAAGAGCCTCAAACTTTTGAAGCTAAAAATAATTTCGCTCTTTTCCAAGCCAGAAGTTCT
ACAGAAAAATGCAAAAGGGCCAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTTAAAACA
AGCGTGGGAGAGTGAGTATCAAATCACTACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATCAAGTAG
AGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAATGAATTGAATTTG
AATGAAAAGTTTATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGAATACAA
AGAATGGGTTAAAAACCATGTGCGGTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAGCCAAAA
GCACGCCTTTGAGTATTGAAAACTCTCATGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

3D structure

• AlphaFold DB: A0A1A9HCN0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	93.111	100	0.935