Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | AA973_RS01635 | Genome accession | NZ_CP011485 |
| Coordinates | 330524..330928 (+) | Length | 134 a.a. |
| NCBI ID | WP_064437353.1 | Uniprot ID | A0A1A9H9B7 |
| Organism | Helicobacter pylori strain ausabrJ05 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 325524..335928
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AA973_RS01600 (AA973_01605) | - | 325697..326635 (-) | 939 | WP_064437347.1 | tetraacyldisaccharide 4'-kinase | - |
| AA973_RS01605 (AA973_01610) | - | 326632..327414 (-) | 783 | WP_064437348.1 | NAD+ synthase | - |
| AA973_RS01615 (AA973_01620) | ilvC | 327663..328655 (+) | 993 | WP_064437349.1 | ketol-acid reductoisomerase | - |
| AA973_RS01620 (AA973_01625) | minD | 328679..329485 (+) | 807 | WP_064437350.1 | septum site-determining protein MinD | - |
| AA973_RS01625 (AA973_01630) | minE | 329482..329715 (+) | 234 | WP_064437351.1 | cell division topological specificity factor MinE | - |
| AA973_RS01630 (AA973_01635) | dprA | 329727..330527 (+) | 801 | WP_064437352.1 | DNA-processing protein DprA | Machinery gene |
| AA973_RS01635 (AA973_01640) | dprB | 330524..330928 (+) | 405 | WP_064437353.1 | Holliday junction resolvase RuvX | Machinery gene |
| AA973_RS01640 (AA973_01645) | - | 331102..331407 (+) | 306 | WP_064437354.1 | hypothetical protein | - |
| AA973_RS01645 (AA973_01650) | - | 331391..331957 (+) | 567 | WP_064437355.1 | hypothetical protein | - |
| AA973_RS01650 (AA973_01655) | - | 332101..333009 (-) | 909 | WP_064437356.1 | RluA family pseudouridine synthase | - |
| AA973_RS01655 (AA973_01660) | recJ | 333009..334559 (-) | 1551 | WP_064437357.1 | single-stranded-DNA-specific exonuclease RecJ | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15255.85 Da Isoelectric Point: 9.5583
>NTDB_id=146258 AA973_RS01635 WP_064437353.1 330524..330928(+) (dprB) [Helicobacter pylori strain ausabrJ05]
MILACDVGLKRIGIATLLNGVILPLEAILRHNRNQASRDLSDLLKEKNIQVLVVGKPNESYANTCARIEHFIKLVDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKKR
MILACDVGLKRIGIATLLNGVILPLEAILRHNRNQASRDLSDLLKEKNIQVLVVGKPNESYANTCARIEHFIKLVDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKKR
Nucleotide
Download Length: 405 bp
>NTDB_id=146258 AA973_RS01635 WP_064437353.1 330524..330928(+) (dprB) [Helicobacter pylori strain ausabrJ05]
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGCATCGCTACGCTTTTAAACGGCGTTATCTTGCCTTTAGAAGC
GATTTTGCGCCACAACAGGAATCAGGCCTCTAGGGATTTGAGCGATTTATTAAAGGAAAAAAACATTCAAGTGCTAGTGG
TGGGCAAGCCTAATGAAAGCTATGCAAATACCTGCGCGCGCATTGAGCATTTTATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATCAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGCGGCT
CGCTATCAAAGACGGCCGGTTAGACTCTTTGAGCGCTTGTAGGATCTTAGAGCGCTATTGCCAGCAGGTTTTAAAAAAGC
GTTGA
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGCATCGCTACGCTTTTAAACGGCGTTATCTTGCCTTTAGAAGC
GATTTTGCGCCACAACAGGAATCAGGCCTCTAGGGATTTGAGCGATTTATTAAAGGAAAAAAACATTCAAGTGCTAGTGG
TGGGCAAGCCTAATGAAAGCTATGCAAATACCTGCGCGCGCATTGAGCATTTTATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATCAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGCGGCT
CGCTATCAAAGACGGCCGGTTAGACTCTTTGAGCGCTTGTAGGATCTTAGAGCGCTATTGCCAGCAGGTTTTAAAAAAGC
GTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
95.455 |
98.507 |
0.94 |