Detailed information NTG0146245

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: AA976_RS07030
• Genome accession: NZ_CP011484
• Coordinates: 1457749..1459191 (+)
• Length: 480 a.a.
• NCBI ID: WP_064436938.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain CC33C
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1452749..1464191

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AA976_RS07005 (AA976_07040)	glmS	1453376..1455169 (-)	1794	WP_064436935.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
AA976_RS07010 (AA976_07045)	-	1455170..1455409 (-)	240	WP_000461837.1	DUF2443 domain-containing protein	-
AA976_RS07015 (AA976_07050)	-	1455452..1455994 (-)	543	WP_064436936.1	hypothetical protein	-
AA976_RS07020 (AA976_07055)	dnaA	1456147..1457520 (+)	1374	WP_064436937.1	chromosomal replication initiator protein DnaA	-
AA976_RS07030 (AA976_07065)	comH	1457749..1459191 (+)	1443	WP_064436938.1	hypothetical protein	Machinery gene
AA976_RS07040 (AA976_07075)	-	1459371..1460123 (+)	753	WP_064436939.1	exodeoxyribonuclease III	-
AA976_RS07045 (AA976_07080)	-	1460120..1460755 (-)	636	WP_000668036.1	outer membrane protein	-
AA976_RS07050 (AA976_07085)	-	1460759..1461106 (-)	348	WP_033593879.1	hypothetical protein	-
AA976_RS07055 (AA976_07090)	recG	1461183..1463054 (+)	1872	WP_064437096.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 480 a.a.
• Molecular weight: 54861.83 Da
• Isoelectric Point: 7.1209

>NTDB_id=146245 AA976_RS07030 WP_064436938.1 1457749..1459191(+) (comH) [Helicobacter pylori strain CC33C]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGIYNISSHKKLTLTITHISTAIVYQPLDE
KLSLETTLSPNRPTIPRNTQIVFSSKELKEPHSNPIPSLNAPMQKPQNKPSSSQQSPQNFPYPESKLGSKNSKNSLLQPL
VTPSKISPTNEVKTPTNDANPPLKHSSQDQENNLFVTPPTEKTLPSNNTPNADANENNENNENRDNVEKQAIRDPNIKEF
ACGKWVYDDENLQAYRPSILKRVDKDKEITTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFTILQA
RSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITRNE
LNLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1443 bp

>NTDB_id=146245 AA976_RS07030 WP_064436938.1 1457749..1459191(+) (comH) [Helicobacter pylori strain CC33C]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCCAAACAGGTTTTGGGCATTT
ATAATATCTCCTCACACAAAAAACTCACGCTCACTATCACCCACATATCCACGGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAGCCCTAACCGCCCTACTATCCCTAGAAACACCCAAATCGTTTTTTCTTCAAAAGA
ATTGAAAGAACCGCACTCAAACCCAATACCTTCTTTAAACGCGCCCATGCAAAAACCACAAAATAAACCCAGCTCATCGC
AACAATCCCCTCAAAACTTTCCCTATCCAGAATCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAACCTTTA
GTAACTCCTAGTAAAATAAGCCCCACTAACGAAGTTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAACATTCTTC
ACAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAGTAACAACACCCCTAACGCTGATG
CGAATGAAAACAATGAAAATAACGAAAATAGGGATAATGTGGAAAAACAAGCGATTAGAGATCCCAATATCAAAGAATTC
GCATGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATAAAGACAA
AGAGATTACAACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTA
AAATCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTTACGATTCTTCAAGCC
AGAAGCTCTACAGAAAAATGCAAAAGGGCTAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTATCTAATAGAAGAGCC
TTTAAAACAAGCATGGGAAAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACG
ATCAAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGTAATGAA
TTGAATTTGAATGAAAAATTCATGGAATTTGTGGAAGTATATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAG
CGAATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAACCAC
GAGCCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTT
TAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.083	100	0.921