Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | EE66_RS06805 | Genome accession | NZ_CP011483 |
| Coordinates | 1386335..1386910 (-) | Length | 191 a.a. |
| NCBI ID | WP_064431431.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain DU15 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1381335..1391910
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EE66_RS06795 (EE66_06790) | - | 1383023..1384266 (-) | 1244 | Protein_1317 | restriction endonuclease subunit S | - |
| EE66_RS06800 (EE66_06795) | - | 1384263..1386302 (-) | 2040 | WP_064431430.1 | N-6 DNA methylase | - |
| EE66_RS06805 (EE66_06800) | comFC | 1386335..1386910 (-) | 576 | WP_064431431.1 | ComF family protein | Machinery gene |
| EE66_RS06810 (EE66_06805) | tmk | 1386898..1387473 (-) | 576 | WP_064431432.1 | dTMP kinase | - |
| EE66_RS06815 (EE66_06810) | coaD | 1387475..1387948 (-) | 474 | WP_001169259.1 | pantetheine-phosphate adenylyltransferase | - |
| EE66_RS06820 (EE66_06815) | - | 1387948..1388511 (-) | 564 | WP_064431433.1 | UbiX family flavin prenyltransferase | - |
| EE66_RS06825 (EE66_06820) | flgA | 1388521..1389177 (-) | 657 | WP_064431434.1 | flagellar basal body P-ring formation chaperone FlgA | - |
| EE66_RS06830 (EE66_06825) | uvrD | 1389174..1391219 (-) | 2046 | WP_064431435.1 | DNA helicase UvrD | - |
Sequence
Protein
Download Length: 191 a.a. Molecular weight: 21377.00 Da Isoelectric Point: 9.4519
>NTDB_id=146221 EE66_RS06805 WP_064431431.1 1386335..1386910(-) (comFC) [Helicobacter pylori strain DU15]
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRNFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSQKAGAEFVRILQEKG
LNTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKPTYGRLRATNTISYAGKSLEFRANNPRNFTFKGDKNLDYFLLDDII
TTGTTLKEALKYLKTLNIKAHFAIALCSADE
Nucleotide
Download Length: 576 bp
>NTDB_id=146221 EE66_RS06805 WP_064431431.1 1386335..1386910(-) (comFC) [Helicobacter pylori strain DU15]
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGTTTAAA
AGTAAGGGTTTTAGAGGGTGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CATTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAGTTTGTGAGAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGTTTAAGGGCTACTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATAAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCACACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
ATGCGTTGTTTGACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGTTTAAA
AGTAAGGGTTTTAGAGGGTGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CATTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCAAAAAGCCGGTGCGGAGTTTGTGAGAATCCTGCAAGAAAAAGGC
TTGAATACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAACCCACTTACGGGCGTTTAAGGGCTACTAATACTATTTCGTATGCCGGGAAAAGCCTGG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATAAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAGCACACTTTGCAATCGCGCTTTG
CAGCGCGGATGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Helicobacter pylori 26695 |
95.288 |
100 |
0.953 |
| ctsW | Campylobacter jejuni subsp. jejuni 81-176 |
36.979 |
100 |
0.372 |