Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | AA971_RS01465 | Genome accession | NZ_CP011482 |
| Coordinates | 301257..301661 (+) | Length | 134 a.a. |
| NCBI ID | WP_064431942.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain L7 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 296257..306661
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AA971_RS01430 (AA971_01430) | - | 296421..297359 (-) | 939 | WP_064431938.1 | tetraacyldisaccharide 4'-kinase | - |
| AA971_RS01435 (AA971_01435) | - | 297356..298138 (-) | 783 | WP_064431939.1 | NAD+ synthase | - |
| AA971_RS01445 (AA971_01445) | ilvC | 298396..299388 (+) | 993 | WP_064432820.1 | ketol-acid reductoisomerase | - |
| AA971_RS01450 (AA971_01450) | minD | 299412..300218 (+) | 807 | WP_064431940.1 | septum site-determining protein MinD | - |
| AA971_RS01455 (AA971_01455) | minE | 300215..300448 (+) | 234 | WP_000051424.1 | cell division topological specificity factor MinE | - |
| AA971_RS01460 (AA971_01460) | dprA | 300460..301260 (+) | 801 | WP_064431941.1 | DNA-processing protein DprA | Machinery gene |
| AA971_RS01465 (AA971_01465) | dprB | 301257..301661 (+) | 405 | WP_064431942.1 | Holliday junction resolvase RuvX | Machinery gene |
| AA971_RS01470 (AA971_01470) | - | 301720..302037 (+) | 318 | WP_064431943.1 | tetratricopeptide repeat protein | - |
| AA971_RS01475 (AA971_01475) | - | 302223..302528 (+) | 306 | WP_064431944.1 | hypothetical protein | - |
| AA971_RS01480 (AA971_01480) | - | 302512..303078 (+) | 567 | WP_064431945.1 | hypothetical protein | - |
| AA971_RS01485 (AA971_01485) | - | 303135..304031 (-) | 897 | WP_064431946.1 | RluA family pseudouridine synthase | - |
| AA971_RS01490 (AA971_01490) | recJ | 304031..305581 (-) | 1551 | WP_064431947.1 | single-stranded-DNA-specific exonuclease RecJ | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15329.77 Da Isoelectric Point: 9.0375
>NTDB_id=146197 AA971_RS01465 WP_064431942.1 301257..301661(+) (dprB) [Helicobacter pylori strain L7]
MILACDVGLKRIGIAALLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPHESYADTNARIEHFIKLLDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYYQQVLKNH
MILACDVGLKRIGIAALLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPHESYADTNARIEHFIKLLDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYYQQVLKNH
Nucleotide
Download Length: 405 bp
>NTDB_id=146197 AA971_RS01465 WP_064431942.1 301257..301661(+) (dprB) [Helicobacter pylori strain L7]
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGAATCGCTGCGCTTTTAAACGGCGTTATCTTGCCTTTAGAAGC
GATTTTGCGCCACAACAGGAATCAGGCTTCTAGGGATTTGAGCGATTTATTGAGGGAAAAAAACATTCAAGTGTTAGTGG
TGGGCAAGCCCCATGAAAGCTATGCGGATACGAACGCGCGCATTGAGCATTTCATCAAGCTTTTGGATTTTAAGGGTGAA
ATCGTTTTTATTAATGAAGACAGATCCAGTATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGCGGCT
CGCTATCAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGCAGGATCTTAGAGCGCTATTATCAGCAGGTTTTAAAAAATC
ATTAG
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGAATCGCTGCGCTTTTAAACGGCGTTATCTTGCCTTTAGAAGC
GATTTTGCGCCACAACAGGAATCAGGCTTCTAGGGATTTGAGCGATTTATTGAGGGAAAAAAACATTCAAGTGTTAGTGG
TGGGCAAGCCCCATGAAAGCTATGCGGATACGAACGCGCGCATTGAGCATTTCATCAAGCTTTTGGATTTTAAGGGTGAA
ATCGTTTTTATTAATGAAGACAGATCCAGTATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGCGGCT
CGCTATCAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGCAGGATCTTAGAGCGCTATTATCAGCAGGTTTTAAAAAATC
ATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
97.761 |
100 |
0.978 |