Detailed information NTG0145405

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: SY84_RS09010
• Genome accession: NZ_CP011389
• Coordinates: 1819059..1820156 (+)
• Length: 365 a.a.
• NCBI ID: WP_245621302.1
• Uniprot ID: -
• Organism: Deinococcus soli (ex Cha et al. 2016) strain N5
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1814059..1825156

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SY84_RS08990 (SY84_08995)	fumC	1814731..1816125 (+)	1395	WP_046843737.1	class II fumarate hydratase	-
SY84_RS08995 (SY84_09000)	-	1816380..1816790 (+)	411	WP_046843738.1	hypothetical protein	-
SY84_RS09000 (SY84_09005)	-	1816920..1817579 (+)	660	WP_046843739.1	response regulator transcription factor	-
SY84_RS09005 (SY84_09010)	-	1817579..1819021 (+)	1443	WP_046843740.1	sensor histidine kinase	-
SY84_RS09010 (SY84_09015)	dprA	1819059..1820156 (+)	1098	WP_245621302.1	DNA-processing protein DprA	Machinery gene
SY84_RS09015 (SY84_09020)	-	1820165..1820452 (-)	288	WP_046843741.1	hypothetical protein	-
SY84_RS09020 (SY84_09025)	-	1820471..1821430 (+)	960	WP_046843742.1	NAD-dependent epimerase/dehydratase family protein	-
SY84_RS09025 (SY84_09030)	dnaA	1821542..1822915 (+)	1374	WP_046845081.1	chromosomal replication initiator protein DnaA	-
SY84_RS09030 (SY84_09035)	dnaN	1823276..1824358 (+)	1083	WP_046843743.1	DNA polymerase III subunit beta	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 37822.44 Da
• Isoelectric Point: 6.1630

>NTDB_id=145405 SY84_RS09010 WP_245621302.1 1819059..1820156(+) (dprA) [Deinococcus soli (ex Cha et al. 2016) strain N5]
MTSPLFDSPAPVPPDERRALLALRFCAQLGPRRIEALRGHFGSAVAAWQAPLRELREVPGLDARAAQAVGAPEALIRADQ
ELARVAQEDVTLLLRGLPGYPAALDALGDPPPALWVRGPLPDLPTVPRAIGIVGTRAASPHAQAFTRMLAADLARAGVIV
VSGLARGIDTAAHGAAVEAGGVSIGVLGSAVNRVYPSENTRLAAQLTLVSEYPLDTGPAQHHFPTRNRLIAALSAGTVVV
EGERKSGSLITATHALECGRTVFAVPGRAGDPRAAGPHALIRDGAVLTEGAADLLTELGWGSVPDAPLPDLPPEQARVLA
ALTGPVTLDDLVTATGLPLPDVQTALVMLNLLGIAEEVGGRWVRR

Nucleotide

• Length: 1098 bp

>NTDB_id=145405 SY84_RS09010 WP_245621302.1 1819059..1820156(+) (dprA) [Deinococcus soli (ex Cha et al. 2016) strain N5]
GTGACCAGCCCGCTGTTCGACTCGCCGGCCCCCGTCCCCCCCGACGAGCGGCGCGCCCTGCTGGCCCTGCGCTTCTGTGC
CCAGCTTGGTCCCCGCCGCATCGAGGCCCTCCGGGGGCACTTCGGGTCGGCGGTGGCCGCGTGGCAGGCCCCGCTGCGGG
AGCTGCGCGAGGTGCCGGGCCTGGACGCCCGCGCCGCGCAGGCCGTCGGGGCCCCGGAGGCCCTGATCCGCGCCGATCAG
GAACTCGCCCGGGTGGCGCAGGAGGACGTGACGCTGCTGCTGCGCGGCCTGCCCGGGTACCCGGCGGCGCTGGACGCGCT
GGGCGACCCGCCGCCCGCCCTGTGGGTGCGCGGCCCGCTGCCGGATCTGCCGACCGTGCCGCGCGCCATCGGGATCGTGG
GGACCCGCGCGGCCAGCCCGCACGCGCAGGCGTTTACGCGGATGCTCGCCGCGGACCTCGCGCGGGCCGGGGTGATCGTC
GTGAGCGGACTGGCGCGTGGCATCGACACCGCCGCGCACGGGGCGGCGGTCGAGGCGGGCGGGGTCAGCATCGGCGTGCT
GGGCAGCGCCGTGAACCGCGTGTACCCCAGCGAGAACACCCGGCTGGCCGCGCAGCTCACGCTGGTCAGCGAGTACCCGC
TGGACACCGGCCCCGCGCAGCACCACTTCCCGACCCGCAACCGCCTGATCGCCGCGCTGAGTGCCGGGACGGTCGTCGTG
GAAGGGGAACGCAAGTCCGGGTCGCTGATCACCGCCACGCACGCCCTGGAATGCGGCCGGACGGTGTTCGCCGTGCCGGG
CCGCGCCGGGGACCCGCGCGCCGCCGGACCGCACGCCCTGATCCGCGACGGCGCGGTGCTCACCGAGGGGGCCGCCGACC
TCCTGACCGAACTGGGCTGGGGCAGCGTCCCGGACGCCCCACTGCCGGACCTGCCGCCCGAGCAGGCGCGGGTGCTAGCG
GCCCTGACCGGACCGGTCACGCTGGACGACCTCGTGACGGCCACGGGCCTGCCACTGCCGGACGTGCAGACGGCGCTCGT
CATGCTGAACCTGCTGGGCATCGCCGAGGAGGTCGGGGGCCGCTGGGTGCGGCGCTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (304-360)

• DNA recombination-mediator protein A (DNA_processg_A) (86-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	68.376	96.164	0.658
dprA	Glaesserella parasuis strain SC1401	35.829	100	0.367