Detailed information NTG0145200

Bioinformatically predicted

Overview

• Name: CJE1441
• Type: Regulator
• Locus tag: CD56_RS03090
• Genome accession: NZ_CP011372
• Coordinates: 577991..578665 (-)
• Length: 224 a.a.
• NCBI ID: WP_047208141.1
• Uniprot ID: -
• Organism: Campylobacter lari strain Slaughter Beach
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 572991..583665

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CD56_RS03050 (CD56_03035)	-	573396..574112 (-)	717	WP_047208134.1	hypothetical protein	-
CD56_RS03055 (CD56_03040)	-	574114..574974 (-)	861	WP_047208135.1	lambda-exonuclease family protein	-
CD56_RS03060 (CD56_03045)	-	574964..575215 (-)	252	WP_047208136.1	hypothetical protein	-
CD56_RS03065 (CD56_03050)	-	575215..575418 (-)	204	WP_047208137.1	hypothetical protein	-
CD56_RS03070 (CD56_03055)	-	576007..576282 (-)	276	WP_047208138.1	hypothetical protein	-
CD56_RS03075 (CD56_03060)	-	576445..576921 (+)	477	WP_047208139.1	hypothetical protein	-
CD56_RS03080 (CD56_03065)	-	577042..577329 (-)	288	WP_039625734.1	hypothetical protein	-
CD56_RS03085 (CD56_03070)	-	577320..577835 (-)	516	WP_047208140.1	Panacea domain-containing protein	-
CD56_RS03090 (CD56_03075)	CJE1441	577991..578665 (-)	675	WP_047208141.1	DNA/RNA non-specific endonuclease	Regulator
CD56_RS03095 (CD56_03080)	-	578672..579094 (-)	423	WP_047208142.1	protein-export chaperone SecB	-
CD56_RS03100 (CD56_03085)	-	579110..579703 (-)	594	WP_047208143.1	hypothetical protein	-
CD56_RS03105 (CD56_03090)	-	579700..580080 (-)	381	WP_047208144.1	hypothetical protein	-
CD56_RS03110 (CD56_03095)	-	580383..581153 (-)	771	WP_047208145.1	hypothetical protein	-
CD56_RS03115 (CD56_03100)	-	581150..581872 (-)	723	WP_047208146.1	S24 family peptidase	-
CD56_RS03120 (CD56_03105)	-	581888..582622 (-)	735	WP_047208147.1	S24 family peptidase	-
CD56_RS03125 (CD56_03110)	-	582735..582956 (+)	222	WP_039625743.1	hypothetical protein	-
CD56_RS08310	-	582953..583123 (+)	171	WP_158339224.1	hypothetical protein	-

Sequence

Protein

• Length: 224 a.a.
• Molecular weight: 26322.96 Da
• Isoelectric Point: 9.9407

>NTDB_id=145200 CD56_RS03090 WP_047208141.1 577991..578665(-) (CJE1441) [Campylobacter lari strain Slaughter Beach]
MKKLIIISLLTTLALANYTQYKPSEDFAKYFTTQNCSQVLDKFYYINCYDYNYKGTKAVAYKLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQKVWNKIEKRERQVALKLGEIEVL
NLVNYDSNPQRIKNQIAIPNSYIKIIKGNNFKECYKVPNYEVDNLSIKRYKFNCDVLTSNNHQS

Nucleotide

• Length: 675 bp

>NTDB_id=145200 CD56_RS03090 WP_047208141.1 577991..578665(-) (CJE1441) [Campylobacter lari strain Slaughter Beach]
ATGAAAAAACTTATAATTATATCACTATTAACAACTCTAGCCTTAGCTAATTACACACAATATAAACCGAGTGAAGATTT
TGCAAAGTATTTTACTACACAAAATTGCTCTCAGGTTTTAGATAAATTTTATTATATTAATTGCTATGATTATAACTACA
AAGGCACTAAAGCAGTAGCTTATAAATTAGAAGCAGATAATCTAAAAGGCGAACAAATCAAAAAACGCCCGCGCTTTGAA
GATGATACAAATATACCTAAAAAATATCGTACCACTTGGAGTGATTATAAAAATAGTGGTTATGATAGAGGACATACCCT
TTCTAATGCCTCTATGAGAAAAACTACTCAAGCTCAAAGAAGTACATTCTTAATGAGTAATATTACTCCGCAAAATCCAC
AAATTAATCAAAAAGTATGGAATAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAGAAATTGAAGTTTTA
AATTTAGTTAATTATGATAGCAACCCACAAAGAATAAAAAATCAAATTGCTATTCCAAACTCTTATATCAAGATTATAAA
AGGTAATAATTTTAAAGAATGCTATAAAGTTCCAAATTATGAAGTCGATAATTTAAGTATAAAAAGATATAAGTTTAATT
GTGATGTTTTAACTAGCAATAATCATCAGTCTTAA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (25-217)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
CJE1441	Campylobacter jejuni RM1221	86.977	95.982	0.835
CJE0566	Campylobacter jejuni RM1221	85.581	95.982	0.821