Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | AAT16_RS07075 | Genome accession | NZ_CP011366 |
| Coordinates | 1418174..1418506 (+) | Length | 110 a.a. |
| NCBI ID | WP_143544895.1 | Uniprot ID | A0AA94HCT1 |
| Organism | Salinicoccus halodurans strain H3B36 isolate soil | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1413174..1423506
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAT16_RS07045 (AAT16_07050) | argH | 1413233..1414612 (+) | 1380 | WP_046790197.1 | argininosuccinate lyase | - |
| AAT16_RS07050 (AAT16_07055) | - | 1414677..1414916 (-) | 240 | WP_046790198.1 | DUF2759 domain-containing protein | - |
| AAT16_RS07055 (AAT16_07060) | - | 1415010..1415636 (+) | 627 | WP_046790199.1 | MBL fold metallo-hydrolase | - |
| AAT16_RS07060 (AAT16_07065) | - | 1415691..1415930 (-) | 240 | WP_017548861.1 | DUF2626 family protein | - |
| AAT16_RS07065 (AAT16_07070) | comGA | 1416151..1417143 (+) | 993 | WP_046790200.1 | competence type IV pilus ATPase ComGA | - |
| AAT16_RS07070 (AAT16_07075) | comGB | 1417208..1418161 (+) | 954 | WP_238983736.1 | competence type IV pilus assembly protein ComGB | - |
| AAT16_RS07075 (AAT16_07080) | comGC | 1418174..1418506 (+) | 333 | WP_143544895.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AAT16_RS07080 (AAT16_07085) | - | 1418517..1418915 (+) | 399 | WP_046790202.1 | hypothetical protein | - |
| AAT16_RS07085 (AAT16_07090) | - | 1418905..1419168 (+) | 264 | WP_046790203.1 | hypothetical protein | - |
| AAT16_RS07090 (AAT16_07095) | - | 1419128..1419571 (+) | 444 | WP_234960389.1 | ComGF family competence protein | - |
| AAT16_RS07095 (AAT16_07100) | - | 1419732..1420217 (+) | 486 | WP_046790204.1 | shikimate kinase | - |
| AAT16_RS07100 (AAT16_07105) | gcvT | 1420464..1421549 (+) | 1086 | WP_046790205.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AAT16_RS07105 (AAT16_07110) | gcvPA | 1421571..1422914 (+) | 1344 | WP_046790206.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 110 a.a. Molecular weight: 11679.64 Da Isoelectric Point: 4.9002
>NTDB_id=145140 AAT16_RS07075 WP_143544895.1 1418174..1418506(+) (comGC) [Salinicoccus halodurans strain H3B36 isolate soil]
MIKNLMKKKFNSKKDDGFTLIEMLLVLLVISVLIILIIPNIAAQSANVQDTGCDAQVKMVQSQIQAYTLNEGGAPASVSA
LVPDYLTNDQVTCANGTGIVIVNGQAAKSE
MIKNLMKKKFNSKKDDGFTLIEMLLVLLVISVLIILIIPNIAAQSANVQDTGCDAQVKMVQSQIQAYTLNEGGAPASVSA
LVPDYLTNDQVTCANGTGIVIVNGQAAKSE
Nucleotide
Download Length: 333 bp
>NTDB_id=145140 AAT16_RS07075 WP_143544895.1 1418174..1418506(+) (comGC) [Salinicoccus halodurans strain H3B36 isolate soil]
ATGATTAAAAATTTAATGAAGAAAAAATTCAACAGCAAAAAAGATGATGGGTTTACATTGATTGAAATGCTCCTCGTGCT
TCTCGTAATATCAGTGCTGATCATTCTTATCATCCCCAATATTGCGGCACAGAGTGCCAATGTACAGGATACAGGGTGCG
ATGCACAGGTGAAGATGGTCCAGAGTCAGATACAGGCTTATACATTGAATGAAGGCGGTGCACCGGCATCTGTCAGTGCC
CTTGTTCCGGATTATCTGACGAATGATCAGGTGACTTGTGCAAATGGAACCGGAATTGTGATTGTAAATGGCCAGGCAGC
GAAATCGGAATAG
ATGATTAAAAATTTAATGAAGAAAAAATTCAACAGCAAAAAAGATGATGGGTTTACATTGATTGAAATGCTCCTCGTGCT
TCTCGTAATATCAGTGCTGATCATTCTTATCATCCCCAATATTGCGGCACAGAGTGCCAATGTACAGGATACAGGGTGCG
ATGCACAGGTGAAGATGGTCCAGAGTCAGATACAGGCTTATACATTGAATGAAGGCGGTGCACCGGCATCTGTCAGTGCC
CTTGTTCCGGATTATCTGACGAATGATCAGGTGACTTGTGCAAATGGAACCGGAATTGTGATTGTAAATGGCCAGGCAGC
GAAATCGGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus MW2 |
57.895 |
86.364 |
0.5 |
| comGC | Staphylococcus aureus N315 |
57.895 |
86.364 |
0.5 |