Detailed information NTG0144923

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: AAV30_RS07065
• Genome accession: NZ_CP011347
• Coordinates: 1389458..1391809 (+)
• Length: 783 a.a.
• NCBI ID: WP_038459264.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain YJ11-1-4
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1384458..1396809

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAV30_RS07025 (AAV30_07025)	yhbY	1384729..1385019 (+)	291	WP_007408257.1	ribosome assembly RNA-binding protein YhbY	-
AAV30_RS07030 (AAV30_07030)	-	1385030..1385599 (+)	570	WP_007408258.1	nicotinate-nucleotide adenylyltransferase	-
AAV30_RS07035 (AAV30_07035)	yqeK	1385589..1386164 (+)	576	WP_032873949.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
AAV30_RS07040 (AAV30_07040)	rsfS	1386168..1386524 (+)	357	WP_007408260.1	ribosome silencing factor	-
AAV30_RS07045 (AAV30_07045)	-	1386521..1387258 (+)	738	WP_038459270.1	class I SAM-dependent DNA methyltransferase	-
AAV30_RS07050 (AAV30_07050)	comER	1387327..1388148 (-)	822	WP_012118027.1	late competence protein ComER	-
AAV30_RS07055 (AAV30_07055)	comEA	1388207..1388821 (+)	615	WP_038459268.1	helix-hairpin-helix domain-containing protein	Machinery gene
AAV30_RS07060 (AAV30_07060)	-	1388888..1389457 (+)	570	WP_038459266.1	ComE operon protein 2	-
AAV30_RS07065 (AAV30_07065)	comEC	1389458..1391809 (+)	2352	WP_038459264.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AAV30_RS19475 (AAV30_07070)	-	1391828..1391962 (-)	135	WP_003152870.1	YqzM family protein	-
AAV30_RS20000	-	1392003..1392154 (+)	152	Protein_1406	hypothetical protein	-
AAV30_RS07075 (AAV30_07075)	holA	1392194..1393235 (+)	1042	Protein_1407	DNA polymerase III subunit delta	-
AAV30_RS07080 (AAV30_07080)	rpsT	1393252..1393518 (-)	267	WP_003152876.1	30S ribosomal protein S20	-
AAV30_RS07085 (AAV30_07085)	gpr	1393721..1394827 (+)	1107	WP_038459261.1	GPR endopeptidase	-
AAV30_RS07090 (AAV30_07090)	spoIIP	1394895..1396088 (+)	1194	WP_007612673.1	stage II sporulation protein P	-
AAV30_RS07095 (AAV30_07095)	-	1396105..1396443 (+)	339	WP_038459259.1	YqxA family protein	-

Sequence

Protein

• Length: 783 a.a.
• Molecular weight: 86584.42 Da
• Isoelectric Point: 9.0950

>NTDB_id=144923 AAV30_RS07065 WP_038459264.1 1389458..1391809(+) (comEC) [Bacillus velezensis strain YJ11-1-4]
MKYKYLLLPLAAVSATAGIAAAHVSWVLLLFLLYLLFIIVKTKQYAPVIVCLVSFCVYFFLYTVCDAANVTRYQAGSYTE
QAVITNIPKVDGAKISAVIRTHDKEKWAASYKIRSLEEKRLIEQLEPGMRCTFTGSLEQPAHATVPGGFDYKEYLYSQQI
HWLFSVTSIQQCEKSKQPLFKLLNIRKNLISIIRNHVPESSAGIVEALTLGERFSIEDDILSAYQNLGVVHLMAISGMHV
GLITAGLFYALIRIGLTREKAGILLLLFLPVYTLLSGAAPSVLRASLMLGFYIAGTLVKRGIHSSAALSLSYLLLLLFNP
YFLWQAGFQLSFAVSASLILSSSILKKAGKSRLAGLAMASFIAELSSLPFLLYHFQQISLVSFPMNMVMVPFYTLFVIPV
SVIGFLLLLLSRQMGECLFDMFDLVMKPVHDFITYAASVDLFTMIVSKPDFVSLLLLAVSVFTLFAALEKGGFLKLRKSA
LFFCAVLAYLICRPYFSPWGEADMLDIGQGDSLFISAPHRKGTVMVDTGGVIAYPGESWKEKRHPYSIGEKVLIPFLNGK
GVKKLDALILTHADQDHIGEAGVLIKNHRVKRLIVPVGFVKEPKDQNILNMAKENNIPVAEAKRGDTITAGDLQFQVLSP
ESSDGRSKNDSSLVLWTVLGGVSWLLTGDLESDGETEVLKTYPKLKADILKAGHHGSKSSTGEAFLKQLQPEAALISAGK
ENRYHHPHEEVLDRLKAYSVNVLRTDVSGTIQYRFKKGAGTFSVFPPYDIEETRAQEVKKTAD

Nucleotide

• Length: 2352 bp

>NTDB_id=144923 AAV30_RS07065 WP_038459264.1 1389458..1391809(+) (comEC) [Bacillus velezensis strain YJ11-1-4]
ATGAAATATAAATACCTTCTTCTGCCTCTGGCGGCGGTTTCTGCAACTGCGGGAATTGCCGCCGCTCATGTCTCCTGGGT
TCTGCTCCTTTTTCTTCTGTATCTTCTCTTTATTATTGTAAAAACAAAGCAGTATGCTCCGGTTATCGTCTGCCTCGTTT
CTTTTTGTGTTTATTTCTTTCTTTATACGGTTTGTGACGCTGCGAATGTAACGCGGTATCAGGCCGGCAGTTATACTGAA
CAGGCCGTCATCACTAATATTCCGAAAGTTGACGGAGCGAAAATATCAGCTGTTATCCGTACACATGACAAGGAAAAATG
GGCGGCTTCGTACAAAATCCGGTCACTTGAGGAAAAGAGACTTATTGAACAGCTCGAACCGGGGATGCGCTGCACGTTTA
CAGGCTCTCTGGAACAGCCTGCACATGCGACGGTTCCCGGAGGTTTTGATTATAAGGAATATCTTTACTCTCAGCAGATT
CACTGGTTATTTTCCGTGACGTCCATTCAGCAGTGTGAAAAATCCAAACAGCCGCTGTTTAAACTGCTGAACATCAGAAA
AAATTTGATTTCGATCATTCGGAATCACGTGCCTGAATCTTCCGCCGGAATTGTTGAAGCGCTGACCTTAGGTGAAAGAT
TTTCTATAGAGGACGATATACTGAGTGCATATCAAAATTTAGGAGTCGTTCATTTAATGGCGATTTCCGGAATGCATGTC
GGTCTTATTACGGCGGGATTATTTTATGCTCTGATCAGAATCGGGCTGACAAGAGAAAAAGCGGGAATTTTGCTGCTGCT
GTTTTTGCCGGTGTATACGCTGCTGAGCGGTGCCGCCCCATCCGTATTGCGCGCATCCCTCATGCTGGGATTTTATATCG
CCGGAACTCTTGTTAAACGCGGCATTCATTCCTCTGCTGCATTGTCCCTGTCTTATCTGCTGCTCCTGCTGTTTAATCCT
TACTTCCTTTGGCAGGCGGGCTTCCAGCTTTCCTTTGCGGTAAGCGCCTCTTTAATTCTGTCATCCTCCATTTTAAAGAA
AGCGGGGAAAAGCAGACTTGCCGGGCTTGCGATGGCTTCATTCATTGCGGAGCTCAGCTCACTTCCGTTTCTTCTCTATC
ATTTTCAGCAGATTTCACTTGTCAGTTTTCCGATGAATATGGTGATGGTGCCATTTTATACGTTATTTGTCATTCCGGTT
TCTGTCATCGGTTTCCTTCTTCTTTTACTTTCAAGGCAGATGGGAGAATGTTTGTTTGATATGTTCGACCTTGTGATGAA
GCCTGTGCATGATTTCATTACATATGCGGCATCCGTTGATTTATTTACTATGATTGTGTCAAAGCCTGACTTTGTTTCCC
TTCTTCTGCTTGCGGTTTCCGTTTTTACGCTTTTTGCGGCTTTGGAAAAGGGAGGTTTTTTAAAACTCAGGAAATCGGCT
CTTTTTTTCTGCGCGGTTTTGGCTTATTTAATATGCCGTCCGTATTTCAGTCCATGGGGAGAAGCGGATATGCTTGATAT
CGGGCAGGGAGACTCACTGTTTATAAGCGCGCCGCACCGCAAAGGGACTGTAATGGTTGATACAGGGGGAGTGATTGCTT
ATCCCGGAGAATCATGGAAAGAAAAACGCCACCCGTATTCTATCGGCGAGAAGGTTTTGATTCCGTTTTTAAACGGAAAA
GGGGTGAAAAAGCTGGATGCGCTGATTTTAACCCATGCGGATCAAGATCACATCGGAGAAGCCGGAGTGTTAATCAAAAA
TCATAGAGTCAAACGGTTAATTGTCCCCGTGGGATTCGTAAAAGAACCGAAAGATCAGAACATATTAAATATGGCGAAAG
AAAACAACATTCCCGTTGCCGAAGCAAAGCGGGGCGACACCATTACAGCCGGTGATCTTCAGTTTCAGGTGCTGTCTCCG
GAGTCGTCTGACGGAAGGAGTAAAAATGATTCGTCACTGGTGCTTTGGACGGTTTTAGGCGGAGTGAGCTGGCTTTTGAC
GGGAGATTTAGAATCGGACGGCGAAACGGAAGTGCTGAAAACGTATCCGAAACTGAAGGCTGATATATTGAAGGCGGGTC
ATCACGGCAGCAAAAGCTCTACGGGTGAAGCCTTTTTGAAACAGCTTCAGCCGGAAGCAGCGCTGATTTCAGCAGGAAAA
GAGAATCGATACCATCATCCGCATGAAGAAGTGCTGGATCGTTTGAAGGCGTACTCTGTCAATGTGCTTCGCACCGATGT
CAGCGGAACGATTCAATACAGATTTAAAAAAGGCGCCGGAACGTTTTCCGTCTTCCCTCCATATGATATAGAAGAAACCA
GGGCGCAAGAAGTAAAAAAGACTGCCGATTGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (26-171)

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

• Competence protein (Competence) (208-469)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	56.865	98.595	0.561