Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   AXE82_RS07065 Genome accession   NZ_CP014234
Coordinates   1610708..1611811 (-) Length   367 a.a.
NCBI ID   WP_062333005.1    Uniprot ID   A0A378Q7A6
Organism   Moraxella osloensis strain CCUG 350     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1605708..1616811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXE82_RS07045 (AXE82_07050) dnaK 1605777..1607699 (-) 1923 WP_062332994.1 molecular chaperone DnaK -
  AXE82_RS07050 (AXE82_07055) grpE 1607843..1608442 (-) 600 WP_062332997.1 nucleotide exchange factor GrpE -
  AXE82_RS07055 (AXE82_07060) - 1608655..1609260 (-) 606 WP_062332999.1 L-threonylcarbamoyladenylate synthase -
  AXE82_RS07060 (AXE82_07065) dprA 1609309..1610538 (-) 1230 WP_062333002.1 DNA-processing protein DprA Machinery gene
  AXE82_RS07065 (AXE82_07070) tsaP 1610708..1611811 (-) 1104 WP_062333005.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  AXE82_RS07070 (AXE82_07075) - 1612132..1613100 (-) 969 WP_115304568.1 IS4 family transposase -
  AXE82_RS07075 (AXE82_07080) def 1613394..1613924 (+) 531 WP_062333011.1 peptide deformylase -
  AXE82_RS07080 (AXE82_07085) hisB 1613947..1614549 (+) 603 WP_062333013.1 imidazoleglycerol-phosphate dehydratase HisB -
  AXE82_RS07085 (AXE82_07090) - 1614643..1615131 (-) 489 WP_036591734.1 YajQ family cyclic di-GMP-binding protein -
  AXE82_RS07090 (AXE82_07095) - 1615411..1616157 (+) 747 WP_062333016.1 glutathione peroxidase -

Sequence


Protein


Download         Length: 367 a.a.        Molecular weight: 39485.51 Da        Isoelectric Point: 9.3743

>NTDB_id=144828 AXE82_RS07065 WP_062333005.1 1610708..1611811(-) (tsaP) [Moraxella osloensis strain CCUG 350]
MTNYNTTTMKKLSFALLATLGMTVTSVAAANNPPPRIKADAPNRYVVKKGDTLWDISGKFLESPWRWKEIWATNKHIRNP
HLIYPKDVIILCVIKGQKLVGVDTGEGCAGIEKAMNAPVTTTTVVSAAGSIAAIPLTAIETWLERNIIVSPDDFKTTPYV
LASKDKNIITGVGNKIYAKGVPLIVGQRYGVYREGEPYVDPVTRKVIGLEVTQVAAGIVTSVASNGVSSIELKKSYGQEV
REGDRVFVEVGQYLPPAFYPKPASVTRGGRVIRILNSISSAGRDGVIAINLGTSQGAEPGDVLTVYQKGALVLDGYSPVK
GGAVRLPSEQIGHVMVFKAFNDISYAYVLDAESPIHEQDFLLPAVGN

Nucleotide


Download         Length: 1104 bp        

>NTDB_id=144828 AXE82_RS07065 WP_062333005.1 1610708..1611811(-) (tsaP) [Moraxella osloensis strain CCUG 350]
ATGACAAACTATAACACCACGACAATGAAAAAATTATCCTTCGCTTTGTTGGCAACCTTAGGTATGACAGTGACTTCAGT
GGCTGCTGCTAACAACCCGCCGCCTCGTATCAAAGCCGATGCTCCCAACCGTTACGTGGTAAAAAAAGGTGATACGCTTT
GGGATATCTCCGGCAAATTCTTAGAAAGTCCGTGGCGCTGGAAAGAAATCTGGGCGACCAATAAGCATATTCGTAATCCG
CATCTGATTTATCCAAAAGATGTGATTATCTTATGTGTGATTAAAGGGCAAAAATTGGTCGGTGTAGATACGGGTGAAGG
CTGTGCAGGCATTGAAAAAGCCATGAACGCGCCAGTCACCACAACCACAGTGGTAAGTGCTGCAGGTAGTATCGCTGCGA
TTCCTTTGACTGCCATTGAAACATGGCTTGAGCGCAATATCATCGTATCGCCTGATGACTTTAAAACTACCCCCTATGTG
CTTGCTTCAAAAGATAAAAATATTATTACAGGTGTCGGTAACAAAATTTATGCCAAAGGCGTGCCACTCATTGTGGGACA
ACGCTATGGCGTGTACCGTGAGGGCGAACCGTATGTTGACCCAGTGACCCGTAAAGTCATCGGTCTTGAAGTCACCCAAG
TTGCCGCAGGTATCGTCACTAGCGTAGCATCAAACGGTGTTTCTAGTATCGAGCTTAAAAAATCGTATGGTCAAGAAGTG
CGCGAAGGTGACCGTGTATTTGTCGAAGTCGGTCAGTACTTGCCACCCGCTTTTTATCCAAAACCTGCCAGCGTTACTCG
TGGCGGTCGCGTGATTCGTATTTTAAATTCCATTAGTAGTGCGGGTCGAGATGGGGTGATTGCCATTAATTTGGGTACCA
GCCAAGGCGCTGAGCCAGGCGATGTGTTGACGGTTTATCAAAAAGGCGCTTTAGTCTTGGATGGCTATTCACCCGTAAAA
GGTGGGGCAGTACGCTTGCCAAGTGAGCAAATCGGTCATGTGATGGTATTTAAAGCATTTAACGATATAAGCTACGCTTA
TGTACTTGATGCAGAATCACCGATTCATGAGCAAGATTTTTTATTGCCTGCGGTCGGCAACTAA

Domains


Predicted by InterProScan.

(45-90)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A378Q7A6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

42.663

100

0.428


Multiple sequence alignment