Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   AAV29_RS01715 Genome accession   NZ_CP011346
Coordinates   320779..321177 (-) Length   132 a.a.
NCBI ID   WP_043866822.1    Uniprot ID   -
Organism   Bacillus velezensis strain JJ-D34     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 315779..326177
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAV29_RS21420 - 316787..316915 (-) 129 Protein_296 hypothetical protein -
  AAV29_RS01690 (AAV29_01690) - 317057..318259 (+) 1203 WP_046559335.1 GTP-binding protein -
  AAV29_RS01695 (AAV29_01695) - 318324..319460 (+) 1137 WP_003156594.1 zinc-dependent alcohol dehydrogenase -
  AAV29_RS01700 (AAV29_01700) - 319475..319909 (+) 435 WP_021494203.1 RDD family protein -
  AAV29_RS01705 (AAV29_01705) - 320026..320301 (+) 276 WP_369719109.1 YckD family protein -
  AAV29_RS21735 - 320405..320488 (+) 84 WP_223151977.1 family 1 glycosylhydrolase -
  AAV29_RS01710 (AAV29_01710) - 320520..320738 (+) 219 Protein_302 family 1 glycosylhydrolase -
  AAV29_RS01715 (AAV29_01715) nin/comJ 320779..321177 (-) 399 WP_043866822.1 competence protein ComJ Regulator
  AAV29_RS01720 (AAV29_01720) nucA/comI 321199..321636 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  AAV29_RS01725 (AAV29_01725) hxlB 321995..322552 (-) 558 WP_014304318.1 6-phospho-3-hexuloisomerase -
  AAV29_RS01730 (AAV29_01730) hxlA 322549..323184 (-) 636 WP_014304319.1 3-hexulose-6-phosphate synthase -
  AAV29_RS01735 (AAV29_01735) - 323416..323778 (+) 363 WP_014304320.1 winged helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 15014.99 Da        Isoelectric Point: 4.6564

>NTDB_id=144827 AAV29_RS01715 WP_043866822.1 320779..321177(-) (nin/comJ) [Bacillus velezensis strain JJ-D34]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVLSYEKKATVPF
EAVKDGIEIESVMSKRLFFNIPKGRYSLTCYSVPAEISDLHADTYIIDADAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=144827 AAV29_RS01715 WP_043866822.1 320779..321177(-) (nin/comJ) [Bacillus velezensis strain JJ-D34]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCGTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTCGAAGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACTATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGACGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

76.744

97.727

0.75

Multiple sequence alignment