Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   XM40_RS14360 Genome accession   NZ_CP011278
Coordinates   2992886..2995180 (-) Length   764 a.a.
NCBI ID   WP_046376725.1    Uniprot ID   -
Organism   Bacillus velezensis strain L-S60     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2987886..3000180
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  XM40_RS14320 (XM40_14320) - 2988346..2988777 (+) 432 WP_003152066.1 Na(+)/H(+) antiporter subunit B -
  XM40_RS14325 (XM40_14325) - 2988777..2989118 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  XM40_RS14330 (XM40_14330) - 2989111..2990592 (+) 1482 WP_043867375.1 Na+/H+ antiporter subunit D -
  XM40_RS14335 (XM40_14335) - 2990598..2991074 (+) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  XM40_RS14340 (XM40_14340) - 2991074..2991358 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  XM40_RS14345 (XM40_14345) mnhG 2991342..2991716 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  XM40_RS14350 (XM40_14350) - 2991756..2992139 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  XM40_RS14355 (XM40_14355) comA 2992161..2992805 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  XM40_RS14360 (XM40_14360) comP 2992886..2995180 (-) 2295 WP_046376725.1 histidine kinase Regulator
  XM40_RS14365 (XM40_14365) comX 2995200..2995379 (-) 180 WP_306383677.1 competence pheromone ComX -
  XM40_RS14370 (XM40_14370) comQ 2995333..2996319 (-) 987 WP_269321599.1 class 1 isoprenoid biosynthesis enzyme Regulator
  XM40_RS14375 (XM40_14375) degQ 2996450..2996590 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  XM40_RS14380 (XM40_14380) - 2997056..2997397 (+) 342 WP_014305721.1 hypothetical protein -
  XM40_RS14385 (XM40_14385) - 2997404..2998624 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 764 a.a.        Molecular weight: 88601.95 Da        Isoelectric Point: 8.5618

>NTDB_id=144142 XM40_RS14360 WP_046376725.1 2992886..2995180(-) (comP) [Bacillus velezensis strain L-S60]
MKKLIKPFTISIIILSVIYVCYVAFININGLIVGTKIVENKHKVLEVAEMSKTSYGKFVGLKQGDMIVKINNKKPSLKYL
KGDTLYHVKSLDIKRNGQQIHLDDFDIVNLNGYYSYFLFVLPLVFYFLSLICIFYIVKVSQTRKSIAGYVLILFLLDISI
AYMSAGGPSRGHEFNRYINLFTFIASPIFYLQFIQEYFKELGKKFANRLISFLYIIPIINLLNEPFRHIYSYDFTTNLNL
VSFFFVTIYAFISVFYHLYKFKYSEHAYILKVLILTNTLSFLLFYVIPIILTGSYILDALAAASLLVLIPLGLVYQFVAN
KIFDIEFILGRMRYYGLLALVPALFIVGISAWFESIDIQMNPAQQTVFFFIVIFVIFYFKEVMDYKFRLKRFSEKFNYQD
SIFKYTQLIRSITSLKQMFKELKKTILDVLLVSKAYVFEVTSEGDILYHDKKDNEPDWEMYSKEFKKVTSEIGKIIELNR
GFLIKIGERGGSSYVLLCLSTINTPRLTRDEISWLKTLSFYTSVSMENVIQIEELMNHLQDLKQQGSNPVWLKKLMFTIE
EKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGLVK
AVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGCNQ
EEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2295 bp        

>NTDB_id=144142 XM40_RS14360 WP_046376725.1 2992886..2995180(-) (comP) [Bacillus velezensis strain L-S60]
TTGAAGAAGCTTATAAAGCCATTTACAATATCCATTATTATTTTAAGTGTTATCTATGTTTGTTATGTCGCTTTTATTAA
CATAAATGGACTTATTGTAGGCACGAAAATTGTAGAAAATAAGCATAAAGTACTCGAAGTTGCTGAAATGTCAAAAACCT
CGTATGGAAAATTTGTAGGTTTAAAACAAGGTGATATGATTGTCAAAATTAATAATAAAAAACCATCTTTAAAATATCTA
AAAGGGGATACTCTCTATCACGTTAAGAGCTTAGATATAAAAAGAAATGGACAGCAAATTCATTTAGATGATTTTGATAT
TGTTAATTTAAATGGATACTACAGTTACTTTTTATTTGTCCTTCCCCTTGTATTTTATTTTTTGAGTTTAATATGTATAT
TTTATATTGTAAAGGTGAGTCAAACCAGAAAATCGATAGCTGGGTATGTCCTAATTCTCTTCCTGTTAGATATCTCAATA
GCTTATATGAGTGCTGGTGGTCCCTCAAGAGGTCATGAATTTAACAGATATATAAATTTGTTTACCTTCATTGCCTCACC
TATATTTTATCTCCAGTTTATTCAAGAGTATTTCAAGGAATTAGGTAAAAAATTTGCCAATCGCTTGATTTCTTTTCTAT
ATATCATACCGATAATTAATCTCTTAAACGAACCGTTTCGACATATTTATTCATATGACTTCACAACAAATTTAAATTTA
GTATCGTTTTTCTTCGTGACTATCTATGCATTTATATCTGTTTTCTATCATCTGTATAAATTCAAGTATTCAGAACATGC
TTATATTCTTAAGGTTTTAATTTTAACAAACACGCTCTCTTTTTTGCTTTTTTATGTAATCCCAATTATTTTGACAGGAA
GTTATATATTAGATGCGTTGGCAGCGGCCTCCCTGCTCGTACTTATCCCATTGGGATTGGTATACCAGTTCGTAGCTAAC
AAAATTTTTGATATTGAATTCATTTTAGGCAGGATGAGGTACTATGGCTTGCTTGCCTTAGTTCCAGCCCTTTTTATTGT
TGGGATTTCAGCTTGGTTCGAGTCAATAGATATACAAATGAATCCTGCTCAGCAAACTGTATTTTTCTTTATTGTGATAT
TTGTTATTTTTTATTTTAAAGAAGTAATGGATTATAAATTTCGGTTAAAACGTTTTTCTGAAAAATTTAATTATCAAGAT
AGTATATTCAAATATACTCAGCTTATCAGAAGCATAACATCTTTAAAACAAATGTTTAAAGAACTAAAAAAGACGATTCT
GGATGTTCTACTTGTCAGTAAAGCTTATGTCTTTGAAGTTACCTCTGAGGGTGACATTTTATATCATGATAAAAAGGATA
ATGAGCCTGACTGGGAAATGTATTCAAAAGAATTTAAGAAAGTTACTTCAGAGATTGGAAAAATCATTGAGCTAAACCGC
GGTTTTTTAATCAAGATAGGAGAACGCGGGGGAAGTTCTTATGTTTTGCTTTGTTTGTCCACTATTAATACACCGAGACT
GACACGAGATGAGATTTCATGGTTGAAGACATTGTCTTTCTATACGAGTGTCTCTATGGAAAATGTGATACAGATCGAAG
AACTCATGAACCATTTACAAGACCTGAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATCGAG
GAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGATTTGATTTCTTTGAAGCGCCAGTGTGA
GCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGA
TGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGTCTGGTCAAG
GCGGTATCCAAGCTTGCCGCGCAGCAGCAAGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTACGGCGGC
GCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCACAGGCGA
ATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGCTGCAATCAG
GAAGAAGGCGGCGGACAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGGACGGATGAA
AATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(564-633)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

72.727

100

0.733

Multiple sequence alignment