Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   AL533_RS16250 Genome accession   NZ_CP014019
Coordinates   3384500..3385135 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter nosocomialis strain FDAARGOS_129     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3379500..3390135
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AL533_RS16230 (AL533_16230) - 3379577..3380392 (+) 816 WP_004710941.1 DsbC family protein -
  AL533_RS16235 (AL533_16235) - 3380637..3381938 (+) 1302 WP_002048970.1 homoserine dehydrogenase -
  AL533_RS16240 (AL533_16240) thrC 3381994..3383133 (+) 1140 WP_002048893.1 threonine synthase -
  AL533_RS16245 (AL533_16245) pbpG 3383242..3384288 (-) 1047 WP_004710943.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  AL533_RS16250 (AL533_16250) letA 3384500..3385135 (+) 636 WP_000633799.1 response regulator Regulator
  AL533_RS16255 (AL533_16255) pilS 3385146..3386714 (+) 1569 WP_004710946.1 sensor histidine kinase Regulator
  AL533_RS16260 (AL533_16260) - 3386739..3388160 (+) 1422 WP_083009365.1 sigma-54-dependent transcriptional regulator -
  AL533_RS16265 (AL533_16265) - 3388164..3389348 (-) 1185 WP_104919133.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=143967 AL533_RS16250 WP_000633799.1 3384500..3385135(+) (letA) [Acinetobacter nosocomialis strain FDAARGOS_129]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=143967 AL533_RS16250 WP_000633799.1 3384500..3385135(+) (letA) [Acinetobacter nosocomialis strain FDAARGOS_129]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCAGATGT
TGAGGTAATTGGACAAGCCGAATCTGGGGAAGAAGCTATTGCTATCGTTCGCCAGCAACATCCGCAAGTCGTACTACTTG
ATGTCAACATGCCAGGCATCGGTGGTGTAGAAACAACTCGTCGTTTATTACAAACAGCTCCAGAGACGAAAGTCATTGCT
GTAAGTGGCCTTGCCGAAGAACCCTACCCATCTTTATTGCTAAAAGCTGGAGCAAAAGGCTATATCACCAAAGGAGCCCC
AATTGCCGAGATGGTTCGTGCAATTAATAAGGTCATGCAGGGTGGTAAATATTTTAGTGCCGATATTGCCGAGCAACTGG
CAAGCTCTTATTTATCTGATACTCAACAATCTCCTTTTGATTCGTTATCGGAGCGGGAAATGCAAGTTGCGATGATGGTC
GTTAACTGTATTAGCGCACAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTACCGTAT
TTTTGAAAAGTTAGGAATTGATAGTGATGTAAAACTCACACATCTTGCGATTCGTTACGGTCTGATCAAACCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55