Detailed information NTG0143898

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: WV34_RS12580
• Genome accession: NZ_CP011252
• Coordinates: 2493325..2495676 (-)
• Length: 783 a.a.
• NCBI ID: WP_088613147.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain MT45
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2488325..2500676

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WV34_RS12550 (WV34_12250)	-	2488687..2489025 (-)	339	WP_045510470.1	YqxA family protein	-
WV34_RS12555 (WV34_12255)	-	2489042..2490235 (-)	1194	WP_088613145.1	stage II sporulation protein P	-
WV34_RS12560 (WV34_12260)	gpr	2490303..2491409 (-)	1107	WP_088613146.1	GPR endopeptidase	-
WV34_RS12565 (WV34_12265)	rpsT	2491612..2491878 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
WV34_RS12570 (WV34_12270)	holA	2491896..2492937 (-)	1042	Protein_2423	DNA polymerase III subunit delta	-
WV34_RS19950	-	2492977..2493131 (-)	155	Protein_2424	hypothetical protein	-
WV34_RS12575 (WV34_12275)	-	2493172..2493306 (+)	135	WP_003152870.1	YqzM family protein	-
WV34_RS12580 (WV34_12280)	comEC	2493325..2495676 (-)	2352	WP_088613147.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
WV34_RS12585 (WV34_12285)	-	2495677..2496246 (-)	570	WP_088613148.1	ComE operon protein 2	-
WV34_RS12590 (WV34_12290)	comEA	2496312..2496926 (-)	615	WP_088613149.1	helix-hairpin-helix domain-containing protein	Machinery gene
WV34_RS12595 (WV34_12295)	comER	2496986..2497807 (+)	822	WP_088613150.1	late competence protein ComER	-
WV34_RS12600 (WV34_12300)	-	2497876..2498613 (-)	738	WP_088613151.1	class I SAM-dependent methyltransferase	-
WV34_RS12605 (WV34_12305)	rsfS	2498610..2498966 (-)	357	WP_045510454.1	ribosome silencing factor	-
WV34_RS12610 (WV34_12310)	yqeK	2498983..2499543 (-)	561	WP_088613152.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
WV34_RS12615 (WV34_12315)	-	2499533..2500102 (-)	570	WP_045510448.1	nicotinate-nucleotide adenylyltransferase	-
WV34_RS12620 (WV34_12320)	yhbY	2500113..2500403 (-)	291	WP_014470707.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 783 a.a.
• Molecular weight: 87053.93 Da
• Isoelectric Point: 9.3251

>NTDB_id=143898 WV34_RS12580 WP_088613147.1 2493325..2495676(-) (comEC) [Bacillus amyloliquefaciens strain MT45]
MKYKYLLLPLAAVSATAGTAAANSFWILFFFLLYLLFIIVKTKQHTPVIVCFVSFCLYFFLYTACDAANVSRYQAGSYTE
QALIINIPKVDGAKMSAVIRTHDKEKWVTSYKIRSLEEKRLIEQLEPGMRCTFTGSLEQPRHATIPGGFDYKEFLYSQHI
HWIFSVTSIKQCEKSEQPLFKLLNIRKNLISIIRNHVPESSAGIVEALTVGERFSIEDDILSAYQNLGVVHLMAISGMHV
GLITAGLFYALIRIGLTREKAGMLLLLFLPVYTLLSGAAPSVLRASLMLGFYIAGTLLKRSIHSSAALSMSYLLLLLFDP
YLLWQAGFQLSFAVSAALILSSSILKKAGKNRLAGLAMASFIAELSSLPFLIYHFQQISLVSFPMNMVMVPFYTLFVIPF
SVIGFLLLLLSRQAGEFLFYLFDLVMKPVHDFITYAASVDLFAMIVSKPDFLSLLMLAVSVFTLFAALEKGGFLKLRKSA
LFFFAVLAYIMFRPFFSPWGEADMLDIGQGDSLFISAPHRKGTVMVDTGGVIAYSEESWKEKHHPYSIGEKVLVPFLNGK
GVKKLDALILTHADQDHIGEAGVLIKKHRVKRLIVPVGFVKEPKDGEILNMAKENNIPVAEAKRGDTITAGDLQFQVLSP
ESPGGRSKNDSSLVLWTVLGGVSWLLTGDLESDGETEVLKTYPNLKADILKAGHHGSKSSTSEAFLKQLRPKTALISAGK
DNRYHHPHEEVLDRLKAYSVNVLRTDVSGTIQYRFTKGAGTFSVFPPYDIEETRAQEVKKTAD

Nucleotide

• Length: 2352 bp

>NTDB_id=143898 WV34_RS12580 WP_088613147.1 2493325..2495676(-) (comEC) [Bacillus amyloliquefaciens strain MT45]
ATGAAATATAAATACCTTCTTCTGCCTCTGGCGGCGGTTTCTGCAACCGCGGGAACTGCCGCCGCTAATTCCTTCTGGAT
CCTATTCTTTTTCCTTCTGTATCTTCTCTTTATTATCGTAAAAACAAAACAGCACACACCGGTTATCGTCTGCTTCGTTT
CTTTTTGTCTTTATTTCTTTCTTTATACGGCTTGTGACGCTGCGAATGTATCCCGGTATCAGGCCGGCAGCTATACTGAA
CAGGCTCTCATCATAAACATTCCGAAGGTTGACGGAGCGAAAATGTCAGCCGTTATCCGTACCCATGACAAAGAAAAATG
GGTCACTTCGTACAAAATCCGGTCCCTTGAAGAAAAAAGACTCATTGAACAGCTGGAACCGGGGATGCGCTGTACGTTTA
CAGGCTCACTGGAACAGCCCCGACATGCGACGATTCCCGGGGGTTTTGATTATAAGGAATTTCTTTACTCCCAGCATATT
CACTGGATATTTTCCGTTACTTCCATTAAGCAGTGCGAAAAATCCGAACAGCCGCTGTTTAAGCTTCTGAACATCAGAAA
GAATTTGATTTCGATCATTCGGAATCATGTACCTGAATCTTCCGCCGGAATTGTTGAGGCGCTGACCGTAGGTGAAAGAT
TTTCTATAGAGGACGATATACTGAGCGCTTATCAAAATTTGGGAGTCGTTCATTTAATGGCGATTTCCGGAATGCATGTC
GGCCTTATTACGGCGGGGTTATTTTATGCCCTTATCAGAATTGGACTGACAAGAGAAAAGGCGGGGATGTTGCTGCTGCT
TTTTTTGCCGGTGTATACGTTGTTAAGCGGTGCCGCCCCTTCTGTGCTGCGCGCATCCCTCATGCTGGGATTTTATATCG
CCGGAACTCTTTTGAAACGCAGCATTCATTCCTCAGCTGCATTGTCCATGTCTTATCTGCTGCTTCTGCTGTTTGATCCT
TACCTCCTTTGGCAGGCGGGCTTCCAGCTTTCCTTTGCGGTAAGCGCCGCTTTAATTCTGTCATCCTCCATTTTAAAGAA
AGCAGGGAAAAACAGACTCGCGGGGCTTGCGATGGCTTCATTCATTGCGGAGCTCAGTTCGCTTCCGTTTCTTATCTATC
ATTTTCAGCAGATTTCGCTCGTCAGTTTTCCGATGAATATGGTGATGGTGCCTTTTTATACGTTATTTGTCATTCCGTTT
TCTGTCATCGGTTTCCTTCTTCTCTTACTTTCCAGGCAGGCGGGGGAATTTTTGTTTTACCTGTTTGACCTTGTGATGAA
GCCTGTGCATGATTTCATTACATATGCGGCATCCGTTGATTTATTTGCAATGATTGTGTCAAAGCCTGACTTTCTGTCGC
TTCTTATGCTTGCGGTTTCCGTTTTTACGCTTTTTGCAGCTTTGGAAAAGGGAGGTTTTTTAAAGCTCAGGAAATCGGCT
CTTTTTTTCTTTGCGGTTTTGGCTTATATAATGTTCCGTCCTTTTTTCAGTCCTTGGGGAGAAGCGGATATGCTTGATAT
CGGGCAGGGAGACTCACTGTTTATAAGTGCCCCGCACCGTAAAGGTACCGTAATGGTTGATACAGGAGGAGTGATTGCTT
ATTCCGAAGAATCGTGGAAAGAAAAACACCACCCGTATTCTATCGGTGAGAAAGTTTTAGTTCCGTTTTTGAACGGAAAA
GGGGTGAAAAAGCTGGATGCGCTGATTTTAACCCATGCGGATCAGGATCATATCGGGGAAGCCGGAGTATTAATCAAAAA
ACATAGAGTGAAACGGTTAATTGTCCCTGTGGGATTCGTGAAGGAACCGAAGGATGGGGAAATATTGAATATGGCGAAAG
AAAACAACATTCCCGTTGCTGAAGCAAAACGGGGCGATACCATAACAGCCGGTGATCTTCAGTTTCAGGTGCTGTCTCCG
GAGTCGCCTGGCGGAAGGAGTAAAAATGATTCGTCACTGGTGCTTTGGACGGTTTTAGGCGGAGTGAGCTGGCTTTTGAC
GGGAGATTTAGAATCGGACGGCGAAACAGAGGTGCTGAAAACGTATCCGAATCTGAAGGCTGATATATTGAAGGCCGGTC
ATCACGGCAGCAAAAGCTCTACGAGTGAAGCCTTTTTGAAACAGCTTCGGCCGAAGACAGCGCTGATTTCAGCAGGAAAA
GATAATCGTTATCATCATCCGCATGAAGAAGTGCTGGATCGTTTGAAAGCTTACTCTGTCAATGTGCTTCGCACCGATGT
CAGCGGAACGATTCAATACAGATTTACAAAAGGCGCCGGAACGTTTTCTGTCTTCCCTCCATATGATATAGAAGAAACCA
GGGCGCAGGAAGTAAAAAAGACTGCCGATTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (27-171)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	55.44	98.595	0.547