Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   WV34_RS06310 Genome accession   NZ_CP011252
Coordinates   1208284..1208940 (+) Length   218 a.a.
NCBI ID   WP_014470612.1    Uniprot ID   A0AAP7N9L0
Organism   Bacillus amyloliquefaciens strain MT45     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1203284..1213940
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WV34_RS06285 (WV34_06165) oppF 1203813..1204730 (+) 918 WP_045506975.1 oligopeptide ABC transporter ATP-binding protein OppF -
  WV34_RS06290 (WV34_06170) - 1204838..1206025 (+) 1188 WP_088612591.1 putative glycoside hydrolase -
  WV34_RS06295 (WV34_06175) - 1206143..1206721 (+) 579 WP_088612592.1 GNAT family N-acetyltransferase -
  WV34_RS06300 (WV34_06180) spx 1206899..1207294 (+) 396 WP_003327578.1 transcriptional regulator Spx -
  WV34_RS06305 (WV34_06185) - 1207352..1208008 (-) 657 WP_065521689.1 TerC family protein -
  WV34_RS20055 - 1208191..1208293 (+) 103 Protein_1179 hypothetical protein -
  WV34_RS06310 (WV34_06190) mecA 1208284..1208940 (+) 657 WP_014470612.1 adaptor protein MecA Regulator
  WV34_RS06315 (WV34_06195) - 1209091..1210251 (+) 1161 WP_088612593.1 competence protein CoiA family protein -
  WV34_RS06320 (WV34_06200) pepF 1210480..1212309 (+) 1830 WP_088613841.1 oligoendopeptidase F Regulator
  WV34_RS20115 (WV34_06205) - 1212345..1212512 (-) 168 WP_016938224.1 hypothetical protein -
  WV34_RS06330 (WV34_06210) spxH 1212797..1213699 (-) 903 WP_013351835.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25982.77 Da        Isoelectric Point: 4.0828

>NTDB_id=143874 WV34_RS06310 WP_014470612.1 1208284..1208940(+) (mecA) [Bacillus amyloliquefaciens strain MT45]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAENREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAQESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=143874 WV34_RS06310 WP_014470612.1 1208284..1208940(+) (mecA) [Bacillus amyloliquefaciens strain MT45]
ATGGAAATAGAAAGAATTAATGAGCATACAGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTCT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAATCGGGAGGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ACGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATTAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
AGAATCATCAGTCAGCATCCACCGTCTTGAAGAATACGGAAAATTGGTGATCGCTGATCATGCGTTATATACGATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.908

100

0.899

Multiple sequence alignment