Detailed information NTG0143097

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: AV644_RS10755
• Genome accession: NZ_CP013908
• Coordinates: 2069717..2070826 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae strain GBS-M002
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2064717..2075826

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AV644_RS10730 (AV644_10365)	-	2065089..2065928 (-)	840	WP_000181758.1	energy-coupling factor ABC transporter ATP-binding protein	-
AV644_RS10735 (AV644_10370)	pgsA	2065928..2066470 (-)	543	WP_000239225.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
AV644_RS10740 (AV644_10375)	yfmH	2066593..2067876 (-)	1284	WP_075316632.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
AV644_RS10745 (AV644_10380)	yfmF	2067878..2069122 (-)	1245	WP_000706188.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
AV644_RS10750 (AV644_10385)	yaaA	2069361..2069714 (+)	354	WP_000384869.1	S4 domain-containing protein YaaA	-
AV644_RS10755 (AV644_10390)	recF	2069717..2070826 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
AV644_RS10760 (AV644_10395)	-	2070838..2071704 (-)	867	WP_000398683.1	GRP family sugar transporter	-
AV644_RS10765 (AV644_10400)	-	2071760..2072422 (-)	663	WP_001873330.1	helix-turn-helix domain-containing protein	-
AV644_RS10770 (AV644_10405)	guaB	2072497..2073978 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
AV644_RS10775 (AV644_10410)	-	2074135..2074620 (-)	486	WP_001034427.1	arginine repressor	-
AV644_RS10780 (AV644_10415)	-	2074630..2075310 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=143097 AV644_RS10755 WP_000264870.1 2069717..2070826(+) (recF) [Streptococcus agalactiae strain GBS-M002]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=143097 AV644_RS10755 WP_000264870.1 2069717..2070826(+) (recF) [Streptococcus agalactiae strain GBS-M002]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAGCATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447