Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | WR52_RS21355 | Genome accession | NZ_CP011155 |
| Coordinates | 4233192..4234235 (-) | Length | 347 a.a. |
| NCBI ID | WP_001013170.1 | Uniprot ID | A0A9Q5QS48 |
| Organism | Bacillus cereus strain HN001 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4228192..4239235
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WR52_RS21310 (WR52_21830) | - | 4228625..4228825 (-) | 201 | WP_000106083.1 | YqzE family protein | - |
| WR52_RS21315 (WR52_21835) | - | 4228864..4229361 (-) | 498 | WP_000836660.1 | shikimate kinase | - |
| WR52_RS21320 (WR52_21840) | - | 4229477..4230127 (-) | 651 | WP_000183863.1 | 2OG-Fe(II) oxygenase | - |
| WR52_RS21325 (WR52_21845) | comGG | 4230302..4230673 (-) | 372 | WP_023523011.1 | competence type IV pilus minor pilin ComGG | - |
| WR52_RS21330 (WR52_21850) | comGF | 4230670..4231140 (-) | 471 | WP_000923097.1 | competence type IV pilus minor pilin ComGF | - |
| WR52_RS21335 (WR52_21855) | - | 4231110..4231412 (-) | 303 | WP_000829462.1 | hypothetical protein | - |
| WR52_RS21340 (WR52_21860) | comGD | 4231405..4231860 (-) | 456 | WP_002094140.1 | competence type IV pilus minor pilin ComGD | - |
| WR52_RS21345 (WR52_21865) | comGC | 4231857..4232156 (-) | 300 | WP_001178687.1 | competence type IV pilus major pilin ComGC | - |
| WR52_RS21350 (WR52_21870) | comGB | 4232168..4233199 (-) | 1032 | WP_080470803.1 | competence type IV pilus assembly protein ComGB | - |
| WR52_RS21355 (WR52_21875) | comGA | 4233192..4234235 (-) | 1044 | WP_001013170.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| WR52_RS21360 (WR52_21880) | - | 4234441..4235136 (+) | 696 | WP_063537440.1 | helix-turn-helix domain-containing protein | - |
| WR52_RS21365 (WR52_21885) | - | 4235262..4235504 (+) | 243 | WP_000440716.1 | DUF2626 domain-containing protein | - |
| WR52_RS21370 (WR52_21890) | - | 4235612..4237006 (+) | 1395 | WP_001094344.1 | L-cystine transporter | - |
| WR52_RS21375 (WR52_21895) | - | 4237086..4237478 (-) | 393 | WP_063537442.1 | hypothetical protein | - |
| WR52_RS21380 (WR52_21900) | - | 4237566..4237781 (-) | 216 | WP_001008320.1 | DUF3912 family protein | - |
| WR52_RS21385 (WR52_21905) | - | 4238034..4238345 (+) | 312 | WP_001093243.1 | hypothetical protein | - |
| WR52_RS21390 (WR52_21910) | - | 4238382..4238870 (-) | 489 | WP_063537444.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39095.50 Da Isoelectric Point: 8.7212
>NTDB_id=142999 WR52_RS21355 WP_001013170.1 4233192..4234235(-) (comGA) [Bacillus cereus strain HN001]
MNGIEIFANAILKEACRVQASDLHIVPRQKDVAVQLRIGKDLMTRQCIEKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGYELKQALKEAGGEC
VTYKHETLESSIRKGYALGFLEEDVYV
MNGIEIFANAILKEACRVQASDLHIVPRQKDVAVQLRIGKDLMTRQCIEKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGYELKQALKEAGGEC
VTYKHETLESSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=142999 WR52_RS21355 WP_001013170.1 4233192..4234235(-) (comGA) [Bacillus cereus strain HN001]
ATGAATGGGATTGAAATTTTTGCGAATGCAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCGGTGCAACTACGTATAGGAAAAGATTTAATGACGAGACAGTGTATTGAAAAGGAGTTTGGAG
AAAAACTTGTCTCACATTTCAAATTTTTAGCATCTATGGACATAGGAGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTTCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGCTACTTGTGTTTACTGGACCGACTGGATCTGGGAAGACGACGACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTCACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGTGATGAAGAAACAGCAAAAATAGCTATAAGAGCAAGTTTGACAGGACATTTAGTAATGACAACACTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGCTTCATGGATTATGGTATAACGAGGCAAGAGATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAGTGTCCGTTTTGCAGAGGAAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAGGCTAGCATATATGAGCTACTATATGGATATGAGTTAAAACAAGCGCTTAAAGAAGCTGGTGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATACGAAAAGGATATGCTTTAGGTTTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGGATTGAAATTTTTGCGAATGCAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCGGTGCAACTACGTATAGGAAAAGATTTAATGACGAGACAGTGTATTGAAAAGGAGTTTGGAG
AAAAACTTGTCTCACATTTCAAATTTTTAGCATCTATGGACATAGGAGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTTCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGCTACTTGTGTTTACTGGACCGACTGGATCTGGGAAGACGACGACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGTCGCATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTCACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGTGATGAAGAAACAGCAAAAATAGCTATAAGAGCAAGTTTGACAGGACATTTAGTAATGACAACACTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGCTTCATGGATTATGGTATAACGAGGCAAGAGATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAGTGTCCGTTTTGCAGAGGAAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAGGCTAGCATATATGAGCTACTATATGGATATGAGTTAAAACAAGCGCTTAAAGAAGCTGGTGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATACGAAAAGGATATGCTTTAGGTTTTTTAGAAGAAGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
55.908 |
100 |
0.559 |
| pilB | Haemophilus influenzae 86-028NP |
40.062 |
92.795 |
0.372 |