Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   VT48_RS05500 Genome accession   NZ_CP011150
Coordinates   1106367..1106564 (+) Length   65 a.a.
NCBI ID   WP_024720057.1    Uniprot ID   -
Organism   Bacillus altitudinis strain W3     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1101367..1111564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VT48_RS05470 (VT48_05470) - 1101766..1101945 (+) 180 WP_008348517.1 YjzC family protein -
  VT48_RS05475 (VT48_05475) - 1102115..1103380 (+) 1266 WP_007499050.1 MFS transporter -
  VT48_RS05480 (VT48_05480) - 1103501..1103695 (-) 195 WP_024720055.1 YjzD family protein -
  VT48_RS05485 (VT48_05485) - 1103908..1104648 (+) 741 WP_046343172.1 hypothetical protein -
  VT48_RS05490 (VT48_05490) - 1104724..1105299 (+) 576 WP_046343173.1 hypothetical protein -
  VT48_RS05495 (VT48_05495) med 1105390..1106355 (+) 966 WP_017360174.1 BMP family ABC transporter substrate-binding protein Regulator
  VT48_RS05500 (VT48_05500) comZ 1106367..1106564 (+) 198 WP_024720057.1 ComZ family protein Regulator
  VT48_RS05505 (VT48_05505) - 1106768..1107001 (-) 234 WP_046343174.1 hypothetical protein -
  VT48_RS05510 (VT48_05510) - 1107171..1108109 (+) 939 WP_008348504.1 beta-ketoacyl-ACP synthase III -
  VT48_RS05515 (VT48_05515) fabF 1108131..1109372 (+) 1242 WP_007499040.1 beta-ketoacyl-ACP synthase II -
  VT48_RS05520 (VT48_05520) - 1109450..1110244 (+) 795 WP_046343175.1 DUF2268 domain-containing protein -
  VT48_RS05525 (VT48_05525) - 1110415..1111395 (+) 981 WP_008348498.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7319.36 Da        Isoelectric Point: 4.2259

>NTDB_id=142821 VT48_RS05500 WP_024720057.1 1106367..1106564(+) (comZ) [Bacillus altitudinis strain W3]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPEALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=142821 VT48_RS05500 WP_024720057.1 1106367..1106564(+) (comZ) [Bacillus altitudinis strain W3]
ATGCAACACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCAGAAGCACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

72.131

93.846

0.677

Multiple sequence alignment