Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   VT48_RS05495 Genome accession   NZ_CP011150
Coordinates   1105390..1106355 (+) Length   321 a.a.
NCBI ID   WP_017360174.1    Uniprot ID   A0A6I5SIG8
Organism   Bacillus altitudinis strain W3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1100390..1111355
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VT48_RS05465 (VT48_05465) argF 1100712..1101662 (+) 951 WP_017360177.1 ornithine carbamoyltransferase -
  VT48_RS05470 (VT48_05470) - 1101766..1101945 (+) 180 WP_008348517.1 YjzC family protein -
  VT48_RS05475 (VT48_05475) - 1102115..1103380 (+) 1266 WP_007499050.1 MFS transporter -
  VT48_RS05480 (VT48_05480) - 1103501..1103695 (-) 195 WP_024720055.1 YjzD family protein -
  VT48_RS05485 (VT48_05485) - 1103908..1104648 (+) 741 WP_046343172.1 hypothetical protein -
  VT48_RS05490 (VT48_05490) - 1104724..1105299 (+) 576 WP_046343173.1 hypothetical protein -
  VT48_RS05495 (VT48_05495) med 1105390..1106355 (+) 966 WP_017360174.1 BMP family ABC transporter substrate-binding protein Regulator
  VT48_RS05500 (VT48_05500) comZ 1106367..1106564 (+) 198 WP_024720057.1 ComZ family protein Regulator
  VT48_RS05505 (VT48_05505) - 1106768..1107001 (-) 234 WP_046343174.1 hypothetical protein -
  VT48_RS05510 (VT48_05510) - 1107171..1108109 (+) 939 WP_008348504.1 beta-ketoacyl-ACP synthase III -
  VT48_RS05515 (VT48_05515) fabF 1108131..1109372 (+) 1242 WP_007499040.1 beta-ketoacyl-ACP synthase II -
  VT48_RS05520 (VT48_05520) - 1109450..1110244 (+) 795 WP_046343175.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 321 a.a.        Molecular weight: 35889.89 Da        Isoelectric Point: 5.9297

>NTDB_id=142820 VT48_RS05495 WP_017360174.1 1105390..1106355(+) (med) [Bacillus altitudinis strain W3]
MKYQRLVMIFSFLLLMLSACSQAPLKGHIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAI
EEFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGGKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATY
DWQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVNLYQKLKKQGVDVVYPAGDGYNIPVIEQIKTDNLSAIGYVTDQ
SNLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSSTIDRAFVKDIEKDIANYKKTGKLPNE
K

Nucleotide


Download         Length: 966 bp        

>NTDB_id=142820 VT48_RS05495 WP_017360174.1 1105390..1106355(+) (med) [Bacillus altitudinis strain W3]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTTATGCTATCTGCTTGCTCGCAGGCGCCGTTAAAAGG
ACATATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTAT
TAAATATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGGATGGTCGACAAGGAGAAAATCGTTGATGCCATT
GAAGAATTTCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTGATCAGTGA
AGATTATCCGAAAACACAATTTATCACGGTCAATGGAGGCAAGCCTCAAGCTGATAATGTCACAAACGTCACGTTTAAAG
GAGAAGCAATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCCAAAACAAAAAAGATTGGTATTCTGGCTACATAT
GATTGGCAAAGTGAAGTAGACGGTTTTATCAAAGGTGCAAAATATCAGGACGAACATGTGCAAGTCCTAGCGGAATTTGT
CGAAAACTGGGATGATGCTGACAAAGCGGTGAACCTCTATCAAAAATTGAAAAAACAAGGTGTAGATGTTGTGTATCCAG
CAGGTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAACCGACAATCTATCTGCGATCGGATATGTCACTGATCAA
TCCAACCTTGGAAGCCATACGGTGTTAACTAGCACTGTACAGCATGTCGATAAAGCGTACAGTATCATTGCGAAGAAGTT
TAATGAAGGCAAGCTAAACGAACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGCT
CAACCATAGACCGCGCTTTTGTGAAAGACATTGAGAAGGATATTGCGAATTACAAAAAAACAGGCAAATTGCCAAATGAA
AAGTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(29-320)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I5SIG8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

64.65

97.819

0.632

Multiple sequence alignment