Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | UE46_RS15710 | Genome accession | NZ_CP011102 |
| Coordinates | 3280267..3280821 (-) | Length | 184 a.a. |
| NCBI ID | WP_036061497.1 | Uniprot ID | A0A1S7FY63 |
| Organism | Listeria weihenstephanensis strain WS 4560 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3275267..3285821
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| UE46_RS15685 (UE46_15610) | - | 3275530..3276447 (-) | 918 | WP_036061493.1 | aldo/keto reductase | - |
| UE46_RS15690 (UE46_15615) | - | 3276520..3277515 (-) | 996 | WP_036061494.1 | DUF4003 family protein | - |
| UE46_RS15695 (UE46_15620) | - | 3277635..3279029 (-) | 1395 | WP_036061495.1 | amino acid permease | - |
| UE46_RS15700 (UE46_15625) | - | 3279226..3279879 (+) | 654 | WP_118907765.1 | DNA alkylation repair protein | - |
| UE46_RS15705 (UE46_15630) | rpsR | 3279972..3280211 (-) | 240 | WP_036061496.1 | 30S ribosomal protein S18 | - |
| UE46_RS15710 (UE46_15635) | ssbA | 3280267..3280821 (-) | 555 | WP_036061497.1 | single-stranded DNA-binding protein | Machinery gene |
| UE46_RS15715 (UE46_15640) | rpsF | 3280879..3281172 (-) | 294 | WP_036061498.1 | 30S ribosomal protein S6 | - |
Sequence
Protein
Download Length: 184 a.a. Molecular weight: 19858.55 Da Isoelectric Point: 4.7522
>NTDB_id=142267 UE46_RS15710 WP_036061497.1 3280267..3280821(-) (ssbA) [Listeria weihenstephanensis strain WS 4560]
MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVNRNFTNQAGEREADFINCVVWRKPAENVANFLKKGSLAGVDGKVQTR
NYEGQDGKRVYVTEILAESVQFLEPRSANGGGNSGGGYSSNNNDGGGQQSYGNSTGGQSQQNDNSYGQQNQQQPQSQSYQ
APRNADPFASDGKPIDISDDDLPF
MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVNRNFTNQAGEREADFINCVVWRKPAENVANFLKKGSLAGVDGKVQTR
NYEGQDGKRVYVTEILAESVQFLEPRSANGGGNSGGGYSSNNNDGGGQQSYGNSTGGQSQQNDNSYGQQNQQQPQSQSYQ
APRNADPFASDGKPIDISDDDLPF
Nucleotide
Download Length: 555 bp
>NTDB_id=142267 UE46_RS15710 WP_036061497.1 3280267..3280821(-) (ssbA) [Listeria weihenstephanensis strain WS 4560]
ATGATGAACCGTGTTGTATTAGTTGGTCGTCTGACAAAAGATCCTGAATTGCGTTATACTCCTGCTGGCGTTGCAGTTGC
GACATTTACACTTGCTGTAAACCGTAACTTTACTAACCAAGCTGGAGAACGTGAAGCAGATTTCATCAATTGTGTTGTTT
GGAGAAAACCAGCCGAAAATGTTGCGAACTTCCTTAAAAAAGGTAGTTTAGCTGGCGTTGACGGTAAGGTTCAAACGCGT
AATTATGAAGGTCAAGATGGCAAGCGTGTCTATGTAACAGAAATTCTTGCTGAAAGTGTGCAATTCCTAGAGCCCCGCAG
TGCAAACGGCGGCGGAAATAGTGGTGGCGGCTACAGCAGTAACAATAATGATGGCGGTGGACAGCAGTCGTACGGTAATA
GTACTGGCGGCCAAAGCCAACAGAATGATAATAGCTACGGACAACAGAATCAACAACAACCTCAATCTCAGAGTTACCAA
GCACCACGTAACGCTGATCCATTTGCTAGTGATGGCAAGCCAATCGACATTTCAGATGACGATTTGCCGTTCTAA
ATGATGAACCGTGTTGTATTAGTTGGTCGTCTGACAAAAGATCCTGAATTGCGTTATACTCCTGCTGGCGTTGCAGTTGC
GACATTTACACTTGCTGTAAACCGTAACTTTACTAACCAAGCTGGAGAACGTGAAGCAGATTTCATCAATTGTGTTGTTT
GGAGAAAACCAGCCGAAAATGTTGCGAACTTCCTTAAAAAAGGTAGTTTAGCTGGCGTTGACGGTAAGGTTCAAACGCGT
AATTATGAAGGTCAAGATGGCAAGCGTGTCTATGTAACAGAAATTCTTGCTGAAAGTGTGCAATTCCTAGAGCCCCGCAG
TGCAAACGGCGGCGGAAATAGTGGTGGCGGCTACAGCAGTAACAATAATGATGGCGGTGGACAGCAGTCGTACGGTAATA
GTACTGGCGGCCAAAGCCAACAGAATGATAATAGCTACGGACAACAGAATCAACAACAACCTCAATCTCAGAGTTACCAA
GCACCACGTAACGCTGATCCATTTGCTAGTGATGGCAAGCCAATCGACATTTCAGATGACGATTTGCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
66.667 |
100 |
0.674 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.891 |
100 |
0.549 |