Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   AVM03_RS13985 Genome accession   NZ_CP013727
Coordinates   2926545..2927372 (+) Length   275 a.a.
NCBI ID   WP_004264723.1    Uniprot ID   A7Z0F5
Organism   Bacillus amyloliquefaciens strain MBE1283     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2921545..2932372
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AVM03_RS13960 (AVM03_13950) - 2922620..2924053 (+) 1434 WP_014304189.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  AVM03_RS13965 (AVM03_13955) tmk 2924050..2924688 (+) 639 WP_004264737.1 dTMP kinase -
  AVM03_RS13970 (AVM03_13960) darA 2924759..2925088 (+) 330 WP_004264734.1 cyclic di-AMP receptor DarA -
  AVM03_RS13975 (AVM03_13965) - 2925101..2925541 (+) 441 WP_004264730.1 YaaR family protein -
  AVM03_RS13980 (AVM03_13970) holB 2925553..2926542 (+) 990 WP_058906507.1 DNA polymerase III subunit delta' -
  AVM03_RS13985 (AVM03_13975) yaaT 2926545..2927372 (+) 828 WP_004264723.1 competence/sporulation regulator complex protein RicT Regulator
  AVM03_RS13990 (AVM03_13980) yabA 2927387..2927746 (+) 360 WP_004264720.1 replication initiation-control protein YabA -
  AVM03_RS13995 (AVM03_13985) - 2927807..2928550 (+) 744 WP_014304191.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  AVM03_RS14000 (AVM03_13990) - 2928537..2928836 (+) 300 WP_004264714.1 GIY-YIG nuclease family protein -
  AVM03_RS14005 (AVM03_13995) rsmI 2928811..2929692 (+) 882 WP_044052729.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  AVM03_RS14010 (AVM03_14000) abrB 2929742..2930032 (-) 291 WP_169510469.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31160.93 Da        Isoelectric Point: 4.6504

>NTDB_id=142218 AVM03_RS13985 WP_004264723.1 2926545..2927372(+) (yaaT) [Bacillus amyloliquefaciens strain MBE1283]
MYNVIGVRFKKAGKIYYFDPNGFDIEQDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFEVCQKKVADHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDLGEMITTANGPAKVVGLNI
LERVLQVELKNREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=142218 AVM03_RS13985 WP_004264723.1 2926545..2927372(+) (yaaT) [Bacillus amyloliquefaciens strain MBE1283]
TTGTACAACGTAATAGGCGTCCGCTTTAAAAAAGCGGGGAAAATTTATTATTTTGATCCGAACGGATTTGATATAGAACA
AGACAGCTGCGTCATTGTTGAAACCGTAAGAGGTGTAGAATACGGGCAGGTTGTCATCGCAAATAAACAAGTGGACGAGC
ATGATGTTGTGCTTCCGCTTCGAAAGGTTATTCGCGTTGCTGATGAACGCGATCTTCTCATTGTAGAAGAAAACAAACAG
GAGGCCCTGTCCGCTTTTGAAGTCTGTCAGAAAAAAGTGGCTGACCACGGCTTAGATATGAAGCTGGTTGATGTTGAATT
TACGTTTGACCGCAATAAAGTCATTTTTTACTTTACGGCAGACGGACGGGTTGATTTCAGGGAATTGGTCAAAGACTTGG
CTTCTATCTTTAAAACGAGAATCGAATTGCGCCAAATCGGGGTAAGGGACGAGGCGAAAATGCTCGGCGGTATCGGACCA
TGCGGGAGAATGCTTTGCTGCTCCACGTTCCTCGGTGATTTTGAACCGGTGTCCATCAAAATGGCGAAGGATCAAAATTT
ATCGTTGAACCCAACGAAGATTTCCGGTCTGTGCGGCCGTTTGATGTGCTGTTTGAAGTATGAAAATGATGAGTATGAGA
CGGCAAAAGAACAGCTGCCGGATTTAGGCGAAATGATTACGACGGCAAACGGCCCCGCAAAGGTTGTCGGTCTTAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGAAGAATCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z0F5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

96.727

100

0.967

Multiple sequence alignment