Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   bslm_RS02100 Genome accession   NZ_CP011101
Coordinates   422374..422496 (+) Length   40 a.a.
NCBI ID   WP_003224994.1    Uniprot ID   G4NQY6
Organism   Bacillus sp. LM 4-2     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 417374..427496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  bslm_RS02085 (BsLM_0392) yclJ 418987..419670 (+) 684 WP_015482792.1 two-component system response regulator YclJ -
  bslm_RS02090 (BsLM_0393) yclK 419657..421078 (+) 1422 WP_082098066.1 two-component system sensor histidine kinase YclK -
  bslm_RS02095 (BsLM_0395) rapC 421242..422390 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  bslm_RS02100 (BsLM_0396) phrC 422374..422496 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  bslm_RS20320 (BsLM_0397) - 422596..422685 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  bslm_RS20325 (BsLM_0398) - 422767..422880 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  bslm_RS02115 (BsLM_0399) - 423034..424398 (-) 1365 WP_038428355.1 aspartate kinase -
  bslm_RS02120 (BsLM_0401) ceuB 424783..425733 (+) 951 WP_038428356.1 petrobactin ABC transporter permease YclN Machinery gene
  bslm_RS02125 (BsLM_0402) yclO 425726..426673 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  bslm_RS02130 (BsLM_0403) yclP 426667..427425 (+) 759 WP_046380785.1 petrobactin ABC transporter ATP-binding protein YclP -

Sequence

Protein


Download         Length: 40 a.a.        Molecular weight: 4197.98 Da        Isoelectric Point: 8.0285

>NTDB_id=142157 bslm_RS02100 WP_003224994.1 422374..422496(+) (phrC) [Bacillus sp. LM 4-2]
MKLKSKLFVICLAAAAIFTAAGVSANAEALDFHVTERGMT

Nucleotide


Download         Length: 123 bp        

>NTDB_id=142157 bslm_RS02100 WP_003224994.1 422374..422496(+) (phrC) [Bacillus sp. LM 4-2]
ATGAAATTGAAATCTAAGTTGTTTGTTATTTGTTTGGCCGCAGCCGCGATTTTTACAGCGGCTGGCGTTTCTGCTAATGC
GGAAGCACTCGACTTTCATGTGACAGAAAGAGGAATGACGTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-40)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NQY6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment