Detailed information NTG0142144

Bioinformatically predicted

Overview

• Name: recP/tkt
• Type: Machinery gene
• Locus tag: AVM03_RS03450
• Genome accession: NZ_CP013727
• Coordinates: 773606..775609 (+)
• Length: 667 a.a.
• NCBI ID: WP_058906052.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain MBE1283
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 768606..780609

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AVM03_RS20230	-	769029..769178 (+)	150	WP_003154013.1	hypothetical protein	-
AVM03_RS03410 (AVM03_03405)	-	769165..769995 (+)	831	WP_003154011.1	prohibitin family protein	-
AVM03_RS03415 (AVM03_03410)	-	770023..770472 (-)	450	WP_015388182.1	YndM family protein	-
AVM03_RS03420 (AVM03_03415)	-	770614..771042 (+)	429	WP_003154006.1	hypothetical protein	-
AVM03_RS03430 (AVM03_03425)	dinR/lexA	771383..772003 (-)	621	WP_003154004.1	transcriptional repressor LexA	Regulator
AVM03_RS03435 (AVM03_03430)	yneA	772160..772471 (+)	312	WP_003154001.1	cell division suppressor protein YneA	-
AVM03_RS03440 (AVM03_03435)	-	772487..773137 (+)	651	WP_003153998.1	YneB family resolvase-like protein	-
AVM03_RS03445 (AVM03_03440)	-	773206..773439 (+)	234	WP_014305066.1	DUF896 domain-containing protein	-
AVM03_RS03450 (AVM03_03445)	recP/tkt	773606..775609 (+)	2004	WP_058906052.1	transketolase	Machinery gene
AVM03_RS03455 (AVM03_03450)	sirA	775761..776207 (+)	447	WP_003153995.1	sporulation inhibitor of replication protein SirA	-
AVM03_RS03460 (AVM03_03455)	-	776293..776511 (+)	219	WP_003153994.1	YneF family protein	-
AVM03_RS03465 (AVM03_03460)	-	776585..776758 (-)	174	WP_012117647.1	aspartyl-phosphate phosphatase Spo0E family protein	-
AVM03_RS03470 (AVM03_03465)	-	776960..777667 (+)	708	WP_088056486.1	cytochrome c biogenesis protein CcdA	-
AVM03_RS03475 (AVM03_03470)	-	777752..778114 (+)	363	WP_007410327.1	response regulator	-
AVM03_RS03480 (AVM03_03475)	-	778194..778685 (+)	492	WP_088005392.1	CcdC family protein	-
AVM03_RS03485 (AVM03_03480)	-	778713..779141 (-)	429	WP_003153987.1	DUF2621 domain-containing protein	-
AVM03_RS03490 (AVM03_03485)	-	779375..779746 (-)	372	WP_003153985.1	Hsp20/alpha crystallin family protein	-
AVM03_RS03495 (AVM03_03490)	-	779841..779987 (-)	147	WP_003153984.1	small acid-soluble spore protein P	-
AVM03_RS03500 (AVM03_03495)	sspO	780017..780163 (-)	147	WP_003153982.1	acid-soluble spore protein SspO	-

Sequence

Protein

• Length: 667 a.a.
• Molecular weight: 72531.67 Da
• Isoelectric Point: 4.9050

>NTDB_id=142144 AVM03_RS03450 WP_058906052.1 773606..775609(+) (recP/tkt) [Bacillus amyloliquefaciens strain MBE1283]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVNPQNPGWFNRDRFVLSAGHGSMLLYSMLHLSG
YDLSIEDLKQFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLELGRLVVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIAELTAAIEKARQNDKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGLEESKLTKEAYAWTFEEDFYVPEEVYGHFNQAVKEAGSKKEQEWNELFAAYKE
KYPELAEQLSLGMKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGIAKKIPFFVGGSADLAGSNKTTIKNGGDFTAKDY
AGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLASLMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRALPNLSVIRPADGNETAAAWKVAVQSQDHPTALVLTRQNLPTIDQQAEEAYAGVEKGAYTVSKAKTDSPDALLLATG
SEVGLAIEAQAKLAEENIHVSVVSMPSWDRFEKQSAEYKNSVLPPNVTKRLAIEMGSSFGWGKFTGLEGDVLAIDRFGAS
APGETIMKEYGFTAENVVDRVKKLLNK

Nucleotide

• Length: 2004 bp

>NTDB_id=142144 AVM03_RS03450 WP_058906052.1 773606..775609(+) (recP/tkt) [Bacillus amyloliquefaciens strain MBE1283]
ATGGATACAATTGAAAAGAAATCAGTTGCCACCATTCGTACACTATCTATAGACGCAATTGAAAAAGCGAATTCCGGACA
CCCGGGCATGCCGATGGGAGCCGCTCCGATGGCATACACGCTGTGGACGAAATTTATGAATGTAAATCCGCAGAATCCGG
GCTGGTTTAACCGCGACCGCTTTGTTTTATCAGCAGGCCACGGTTCAATGCTTTTATACAGCATGCTGCATTTAAGCGGA
TATGACCTCAGCATTGAAGACTTGAAACAGTTCCGTCAATGGGGAAGCAAAACACCGGGACATCCGGAGTTCGGGCATAC
AGCCGGAGTAGACGCAACGACCGGGCCGCTTGGACAGGGGATTGCAATGGCAGTGGGAATGGCAATTGCAGAACGCCATC
TGGCTGAGACATATAACCGTGATTCATTCAACGTAGTTGATCATTATACATACAGTATTTGCGGAGACGGCGATTTAATG
GAAGGCATTTCTTCCGAAGCCGCTTCTCTTGCAGGCCATCTTGAATTAGGCCGCCTGGTCGTATTATACGATTCTAATGA
CATTTCCTTAGACGGCGATTTAGACCGTTCTTTCTCTGAAAATGTAAAGCAGCGTTTTGAAGCAATGAACTGGGAAGTTC
TTTATGTTGAGGACGGAAACAACATCGCTGAATTGACGGCTGCAATTGAAAAAGCGCGCCAGAATGATAAAAAACCGACT
TTGATTGAAGTGAAAACCACGATCGGTTTCGGTTCTCCAAACCGCGCGGGCACATCCGGCGTTCACGGCGCTCCGTTAGG
ACTAGAAGAGAGCAAGCTGACAAAAGAAGCGTATGCTTGGACGTTTGAAGAAGATTTTTATGTTCCGGAAGAAGTATACG
GGCATTTCAATCAAGCTGTAAAAGAAGCCGGCTCGAAAAAAGAACAGGAATGGAATGAACTGTTCGCGGCTTATAAAGAA
AAATATCCTGAGCTTGCTGAACAGCTGTCACTCGGCATGAAAGGCGAGCTTCCTAAAGACTGGGATCAGGAAGTTCCCGT
TTATGAAAAAGGCAGCAGCCTTGCTTCCCGCGCATCTTCAGGTGAGGTACTGAACGGGATCGCCAAGAAAATTCCTTTCT
TTGTCGGGGGATCTGCTGACCTTGCGGGTTCAAATAAAACGACAATCAAAAATGGAGGAGACTTCACGGCCAAAGACTAC
GCCGGGAAAAACTTCTGGTTCGGTGTCCGTGAATTTGCGATGGGCGCTGCATTAAACGGAATGGCGCTTCACGGCGGCCT
CCGCGTATTCGGCGGCACATTCTTTGTATTCTCTGATTATTTAAGACCTGCCATTCGTCTGGCATCATTGATGGGACTCC
CTGTCACTTATGTATTCACGCATGACAGTATTGCCGTAGGAGAAGACGGGCCGACTCACGAACCGGTTGAGCAGCTTGCT
TCTTTACGCGCACTTCCTAACCTTTCTGTGATCAGACCTGCTGACGGAAATGAAACCGCAGCTGCATGGAAGGTTGCCGT
TCAAAGCCAAGATCATCCGACAGCTCTTGTATTGACACGCCAAAACCTGCCGACGATTGATCAGCAGGCTGAAGAAGCGT
ATGCGGGCGTGGAAAAAGGGGCTTATACCGTTTCCAAAGCAAAAACCGATTCACCGGACGCCCTTCTTTTAGCGACAGGC
TCTGAAGTCGGACTTGCGATCGAAGCTCAAGCGAAACTGGCTGAAGAAAACATTCACGTATCTGTAGTCAGCATGCCGAG
CTGGGACCGCTTTGAAAAACAATCGGCTGAGTACAAAAACAGCGTGCTTCCTCCGAATGTGACGAAACGTCTTGCGATCG
AAATGGGTTCAAGCTTCGGATGGGGCAAATTTACCGGTCTTGAAGGAGACGTTCTCGCAATTGATCGTTTCGGTGCTTCA
GCTCCGGGAGAAACAATTATGAAAGAATACGGGTTTACTGCAGAAAACGTGGTTGACCGCGTGAAAAAACTTCTAAACAA
ATAA

Domains

Predicted by InterProScan.

• Transketolase, thiamine diphosphate binding domain (Transketolase_N) (5-338)

• Transketolase, C-terminal domain (Transketolase_C) (548-657)

• Transketolase, pyrimidine binding domain (Transket_pyr) (354-524)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recP/tkt	Streptococcus pneumoniae TIGR4	56.193	99.25	0.558