Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   VT08_RS07015 Genome accession   NZ_CP011069
Coordinates   1422619..1423344 (-) Length   241 a.a.
NCBI ID   WP_002983379.1    Uniprot ID   A0A4U7HHL6
Organism   Streptococcus pyogenes strain STAB09014     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1417619..1428344
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VT08_RS06980 (VT08_07000) rnpM 1417653..1417949 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  VT08_RS06985 (VT08_07005) nusA 1417965..1419122 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  VT08_RS06990 (VT08_07010) rimP 1419297..1419833 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  VT08_RS07000 (VT08_07020) trmB 1420092..1420727 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  VT08_RS07005 (VT08_07025) ccrZ 1420727..1421518 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  VT08_RS07010 (VT08_07030) - 1421582..1422616 (-) 1035 WP_011285080.1 ABC transporter permease -
  VT08_RS07015 (VT08_07035) pptA 1422619..1423344 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  VT08_RS07020 (VT08_07040) - 1423416..1423835 (+) 420 WP_011285081.1 HIT family protein -
  VT08_RS07025 (VT08_07045) - 1423832..1424188 (+) 357 WP_002988657.1 hypothetical protein -
  VT08_RS07030 (VT08_07050) brpA 1424299..1425582 (-) 1284 WP_002983372.1 biofilm formation/cell division transcriptional regulator BrpA -
  VT08_RS07035 (VT08_07055) - 1425591..1426115 (-) 525 WP_065244905.1 GNAT family N-acetyltransferase -
  VT08_RS07040 (VT08_07060) tsaE 1426090..1426551 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  VT08_RS07045 (VT08_07065) - 1426705..1428165 (-) 1461 WP_002988645.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26678.75 Da        Isoelectric Point: 4.5624

>NTDB_id=141997 VT08_RS07015 WP_002983379.1 1422619..1423344(-) (pptA) [Streptococcus pyogenes strain STAB09014]
MLNIKNLTGGYHNIPVLNDVSFSVDNGELVGLIGLNGAGKSTTINEIIGFLKPYQGSISIDGLTLAENAVAYRQKIGFIP
ETPSLYEELTLSEHINTVAMAYDIDLEVAQKRAQPFLEMFRLTDKLEWFPVNFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAERMCDRFVILHHGQVRAQGTLADLQEAFGDRSASLNDIYLALTKE
D

Nucleotide


Download         Length: 726 bp        

>NTDB_id=141997 VT08_RS07015 WP_002983379.1 1422619..1423344(-) (pptA) [Streptococcus pyogenes strain STAB09014]
ATGTTAAACATTAAAAATCTAACAGGAGGATATCACAATATCCCTGTTTTAAACGATGTCTCATTTTCTGTAGATAATGG
AGAGTTAGTCGGTTTGATCGGGCTAAATGGTGCTGGAAAGTCAACAACTATCAACGAAATTATTGGCTTTTTGAAGCCTT
ATCAAGGAAGTATTTCTATTGATGGTTTAACTCTAGCAGAAAATGCAGTTGCCTACCGTCAAAAAATAGGTTTTATCCCA
GAAACTCCTAGTCTCTATGAAGAATTGACCTTATCAGAGCATATCAACACCGTAGCTATGGCTTATGATATCGACTTAGA
AGTGGCACAAAAACGAGCACAACCTTTCTTGGAAATGTTTCGTTTAACTGACAAACTTGAATGGTTTCCTGTCAATTTTT
CTAAAGGGATGAAACAAAAAGTCATGATTATTTGTGCCTTTGTCATTGATCCAAGTCTATTTATTCTTGATGAACCATTC
TTAGGGTTAGACCCTTTAGCTATTTCAGACTTAATCCAAACGCTAGAAGTCGAAAAAGCAAAAGGAAAATCTATTTTGAT
GAGTACACATGTTTTGGACTCTGCTGAAAGAATGTGTGATCGCTTTGTGATTTTGCATCATGGACAAGTTCGTGCCCAAG
GAACTCTTGCTGACTTGCAAGAAGCTTTTGGTGACCGTTCAGCGAGCTTAAATGATATCTATCTTGCATTAACAAAAGAG
GATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U7HHL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722
  pptA Streptococcus thermophilus LMD-9

71.967

99.17

0.714

Multiple sequence alignment