Detailed information
Bioinformatically predicted
Overview
| Name | recF | Type | Machinery gene |
| Locus tag | AU077_RS10075 | Genome accession | NZ_CP013688 |
| Coordinates | 1981732..1982826 (-) | Length | 364 a.a. |
| NCBI ID | WP_014295505.1 | Uniprot ID | A0A2G3NV23 |
| Organism | Streptococcus gallolyticus strain ICDDRB-NRC-S1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1976732..1987826
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AU077_RS10060 (AU077_10060) | guaB | 1977659..1979140 (+) | 1482 | WP_014295507.1 | IMP dehydrogenase | - |
| AU077_RS10065 (AU077_10065) | - | 1979322..1980578 (+) | 1257 | WP_058621475.1 | ISL3 family transposase | - |
| AU077_RS10070 (AU077_10070) | - | 1980803..1981669 (+) | 867 | WP_014295506.1 | GRP family sugar transporter | - |
| AU077_RS10075 (AU077_10075) | recF | 1981732..1982826 (-) | 1095 | WP_014295505.1 | DNA replication/repair protein RecF | Machinery gene |
| AU077_RS10080 (AU077_10080) | yaaA | 1982829..1983206 (-) | 378 | WP_014295504.1 | S4 domain-containing protein YaaA | - |
| AU077_RS11250 | - | 1983330..1983452 (-) | 123 | Protein_1997 | site-specific integrase | - |
| AU077_RS10085 (AU077_10085) | - | 1983654..1984136 (-) | 483 | WP_230937547.1 | hypothetical protein | - |
| AU077_RS12020 | - | 1984315..1984470 (+) | 156 | Protein_1999 | GntR family transcriptional regulator | - |
| AU077_RS12025 | - | 1984450..1984779 (+) | 330 | WP_371410740.1 | FCD domain-containing protein | - |
| AU077_RS11795 | - | 1984783..1984944 (+) | 162 | WP_229024997.1 | hypothetical protein | - |
| AU077_RS10095 (AU077_10095) | - | 1985042..1985879 (-) | 838 | Protein_2002 | YitT family protein | - |
| AU077_RS10100 (AU077_10100) | - | 1985955..1986371 (-) | 417 | WP_230937548.1 | hypothetical protein | - |
| AU077_RS10105 (AU077_10105) | - | 1986551..1986868 (+) | 318 | WP_039671342.1 | hypothetical protein | - |
| AU077_RS11120 | - | 1987531..1987707 (+) | 177 | WP_158527003.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 364 a.a. Molecular weight: 41836.00 Da Isoelectric Point: 7.1290
>NTDB_id=141997 AU077_RS10075 WP_014295505.1 1981732..1982826(-) (recF) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
MWIQKITLKNYRNYLTSELEFSPGLNVFIGKNAQGKTNFLEAIYFLSLTRSHRTRTDKELIHFDAKELLVSGILQRSSGT
VPLDISLSSKGRVTKVNHLKQAKLSDYIGVMTIVLFAPEDLQLIKGAPSLRRKFIDIDLGQIKPIYLADLSNYNHVLKQR
NTYLKTAEKVDTDFLAVVDEQLADFGSRVMEHRLDFISNLEKEADRYHYAISNGIEHLSIHYLSSVFFQEKDDIKPIFLK
ALQKNHQRDIFKKNTSVGPHRDDLEFFINDMPANFGSQGQHRSLILSLKMAEIELIKTVTGDYPILLLDDVMSELDNYRQ
TELLKMIINKNVQTFITTTSLDHLSQLPDELKIFTVNQGNIQEN
MWIQKITLKNYRNYLTSELEFSPGLNVFIGKNAQGKTNFLEAIYFLSLTRSHRTRTDKELIHFDAKELLVSGILQRSSGT
VPLDISLSSKGRVTKVNHLKQAKLSDYIGVMTIVLFAPEDLQLIKGAPSLRRKFIDIDLGQIKPIYLADLSNYNHVLKQR
NTYLKTAEKVDTDFLAVVDEQLADFGSRVMEHRLDFISNLEKEADRYHYAISNGIEHLSIHYLSSVFFQEKDDIKPIFLK
ALQKNHQRDIFKKNTSVGPHRDDLEFFINDMPANFGSQGQHRSLILSLKMAEIELIKTVTGDYPILLLDDVMSELDNYRQ
TELLKMIINKNVQTFITTTSLDHLSQLPDELKIFTVNQGNIQEN
Nucleotide
Download Length: 1095 bp
>NTDB_id=141997 AU077_RS10075 WP_014295505.1 1981732..1982826(-) (recF) [Streptococcus gallolyticus strain ICDDRB-NRC-S1]
ATGTGGATTCAAAAAATAACGTTAAAAAATTATCGTAACTATCTGACTAGTGAGCTTGAATTTTCTCCTGGACTTAATGT
TTTCATCGGAAAAAATGCTCAAGGAAAAACAAATTTCTTAGAAGCAATTTATTTCCTTTCTCTCACCCGCAGCCACCGCA
CACGGACAGACAAAGAGTTGATTCATTTTGATGCCAAAGAACTTCTGGTTTCTGGTATTTTACAACGTTCAAGTGGTACT
GTTCCTTTAGATATTAGTCTTTCAAGTAAGGGACGTGTTACAAAAGTCAATCATCTAAAACAAGCTAAGTTATCAGACTA
TATTGGTGTAATGACCATTGTTCTTTTTGCACCTGAAGATTTACAACTCATCAAAGGCGCTCCAAGCCTTCGTCGAAAAT
TTATTGACATTGATTTAGGGCAAATAAAGCCGATTTATTTAGCTGATTTGTCTAATTATAACCACGTGCTAAAACAGCGT
AATACTTATCTTAAAACGGCTGAAAAAGTTGATACTGATTTTTTAGCTGTGGTTGACGAGCAATTAGCTGATTTTGGTAG
CCGTGTCATGGAACATCGTTTAGATTTCATTTCTAATTTAGAAAAAGAAGCCGACCGCTATCATTATGCCATTTCAAACG
GTATTGAACATCTTAGTATCCATTATCTATCATCTGTTTTCTTCCAAGAAAAGGATGACATTAAGCCAATTTTCTTAAAA
GCTTTACAAAAAAATCATCAGCGTGATATTTTCAAAAAGAATACAAGTGTTGGTCCCCACCGTGATGATTTAGAATTTTT
CATCAATGATATGCCAGCAAATTTTGGCAGCCAAGGTCAGCACCGTAGCCTAATCTTATCACTAAAAATGGCTGAAATTG
AGTTAATAAAAACAGTAACTGGTGATTATCCTATTTTACTTTTAGATGATGTCATGAGCGAGCTTGATAATTACAGACAA
ACCGAACTCTTAAAAATGATTATTAATAAAAACGTTCAAACCTTCATTACAACAACAAGCCTCGACCACCTATCACAGCT
TCCGGACGAGTTAAAAATCTTTACAGTTAATCAAGGTAACATTCAAGAAAATTAA
ATGTGGATTCAAAAAATAACGTTAAAAAATTATCGTAACTATCTGACTAGTGAGCTTGAATTTTCTCCTGGACTTAATGT
TTTCATCGGAAAAAATGCTCAAGGAAAAACAAATTTCTTAGAAGCAATTTATTTCCTTTCTCTCACCCGCAGCCACCGCA
CACGGACAGACAAAGAGTTGATTCATTTTGATGCCAAAGAACTTCTGGTTTCTGGTATTTTACAACGTTCAAGTGGTACT
GTTCCTTTAGATATTAGTCTTTCAAGTAAGGGACGTGTTACAAAAGTCAATCATCTAAAACAAGCTAAGTTATCAGACTA
TATTGGTGTAATGACCATTGTTCTTTTTGCACCTGAAGATTTACAACTCATCAAAGGCGCTCCAAGCCTTCGTCGAAAAT
TTATTGACATTGATTTAGGGCAAATAAAGCCGATTTATTTAGCTGATTTGTCTAATTATAACCACGTGCTAAAACAGCGT
AATACTTATCTTAAAACGGCTGAAAAAGTTGATACTGATTTTTTAGCTGTGGTTGACGAGCAATTAGCTGATTTTGGTAG
CCGTGTCATGGAACATCGTTTAGATTTCATTTCTAATTTAGAAAAAGAAGCCGACCGCTATCATTATGCCATTTCAAACG
GTATTGAACATCTTAGTATCCATTATCTATCATCTGTTTTCTTCCAAGAAAAGGATGACATTAAGCCAATTTTCTTAAAA
GCTTTACAAAAAAATCATCAGCGTGATATTTTCAAAAAGAATACAAGTGTTGGTCCCCACCGTGATGATTTAGAATTTTT
CATCAATGATATGCCAGCAAATTTTGGCAGCCAAGGTCAGCACCGTAGCCTAATCTTATCACTAAAAATGGCTGAAATTG
AGTTAATAAAAACAGTAACTGGTGATTATCCTATTTTACTTTTAGATGATGTCATGAGCGAGCTTGATAATTACAGACAA
ACCGAACTCTTAAAAATGATTATTAATAAAAACGTTCAAACCTTCATTACAACAACAAGCCTCGACCACCTATCACAGCT
TCCGGACGAGTTAAAAATCTTTACAGTTAATCAAGGTAACATTCAAGAAAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recF | Streptococcus pneumoniae R6 |
64.56 |
100 |
0.646 |
| recF | Bacillus subtilis subsp. subtilis str. 168 |
46.418 |
95.879 |
0.445 |