Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | BIS30_RS12460 | Genome accession | NZ_CP011051 |
| Coordinates | 2388797..2389945 (+) | Length | 382 a.a. |
| NCBI ID | WP_003224987.1 | Uniprot ID | - |
| Organism | Bacillus spizizenii strain T30 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2383797..2394945
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BIS30_RS12440 (BIS30_12440) | - | 2384181..2384861 (-) | 681 | WP_003224979.1 | ABC transporter ATP-binding protein | - |
| BIS30_RS12445 (BIS30_12445) | - | 2384877..2386331 (-) | 1455 | WP_003224981.1 | ABC transporter permease | - |
| BIS30_RS12450 (BIS30_12450) | yclJ | 2386544..2387227 (+) | 684 | WP_003224983.1 | two-component system response regulator YclJ | - |
| BIS30_RS12455 (BIS30_12455) | yclK | 2387214..2388635 (+) | 1422 | WP_079996289.1 | two-component system sensor histidine kinase YclK | - |
| BIS30_RS12460 (BIS30_12460) | rapC | 2388797..2389945 (+) | 1149 | WP_003224987.1 | response regulator aspartate phosphatase RapC | Regulator |
| BIS30_RS12465 (BIS30_12465) | phrC | 2389929..2390051 (+) | 123 | WP_003224994.1 | phosphatase RapC inhibitor PhrC | Regulator |
| BIS30_RS12470 (BIS30_12470) | - | 2390150..2390257 (-) | 108 | WP_003224996.1 | YjcZ family sporulation protein | - |
| BIS30_RS12475 (BIS30_12475) | - | 2390406..2391770 (-) | 1365 | WP_003224998.1 | aspartate kinase | - |
| BIS30_RS12480 (BIS30_12480) | ceuB | 2392155..2393105 (+) | 951 | WP_003225000.1 | petrobactin ABC transporter permease YclN | Machinery gene |
| BIS30_RS12485 (BIS30_12485) | yclO | 2393098..2394045 (+) | 948 | WP_003225003.1 | petrobactin ABC transporter permease YclO | - |
| BIS30_RS12490 (BIS30_12490) | yclP | 2394039..2394797 (+) | 759 | WP_003225005.1 | petrobactin ABC transporter ATP-binding protein YclP | - |
Sequence
Protein
Download Length: 382 a.a. Molecular weight: 45593.58 Da Isoelectric Point: 4.8970
>NTDB_id=141795 BIS30_RS12460 WP_003224987.1 2388797..2389945(+) (rapC) [Bacillus spizizenii strain T30]
MKSGVIPSSAVGQKINEWYKYIRTFSVPDAEVLKAEIQQELNHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALDMAEAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIINSLPQAYFLITLIYYKRGKHDKASAYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI
MKSGVIPSSAVGQKINEWYKYIRTFSVPDAEVLKAEIQQELNHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALDMAEAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIINSLPQAYFLITLIYYKRGKHDKASAYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI
Nucleotide
Download Length: 1149 bp
>NTDB_id=141795 BIS30_RS12460 WP_003224987.1 2388797..2389945(+) (rapC) [Bacillus spizizenii strain T30]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAAATATATCCGCACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAACCACATGCAGCACGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGCCACCAGCTTATGCTTGATTATCTAGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCG
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTTGACTATTATGTGAATTTTTT
CCGCGGAATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATATTATAAACAGGCGGAGAAAAAGCTTTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATAGCTGAAGCTTATTATTATATGAAGCAAACGTACTTT
TCACTGATCAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGGAATTTCGAACAAGCCGCACGCCATTTCAAACTGGCGCTCGATATGGCCG
AAGCAGAACAAAAAGCCCAGCTGGTCGGAAGAGCATATTACAATCTTGGGTTATGCTATTACAATCAAGACCTTCTTGAC
CCTGCTATTGACTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGAATCATTAATTCGCTGCCGCAAGCCTATTT
TTTAATCACCTTGATTTATTATAAACGGGGAAAACATGATAAAGCTTCGGCATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTACGCGGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAAATATATCCGCACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAACCACATGCAGCACGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGCCACCAGCTTATGCTTGATTATCTAGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCG
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAACCAGGCAGATCTCAAAGGGCTGCTTGACTATTATGTGAATTTTTT
CCGCGGAATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATATTATAAACAGGCGGAGAAAAAGCTTTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAAATAGCTGAAGCTTATTATTATATGAAGCAAACGTACTTT
TCACTGATCAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGGAATTTCGAACAAGCCGCACGCCATTTCAAACTGGCGCTCGATATGGCCG
AAGCAGAACAAAAAGCCCAGCTGGTCGGAAGAGCATATTACAATCTTGGGTTATGCTATTACAATCAAGACCTTCTTGAC
CCTGCTATTGACTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGAATCATTAATTCGCTGCCGCAAGCCTATTT
TTTAATCACCTTGATTTATTATAAACGGGGAAAACATGATAAAGCTTCGGCATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTACGCGGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
97.906 |
100 |
0.979 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
57.105 |
99.476 |
0.568 |