Detailed information NTG0141782

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: BIS30_RS08455
• Genome accession: NZ_CP011051
• Coordinates: 1600227..1601372 (+)
• Length: 381 a.a.
• NCBI ID: WP_003222022.1
• Uniprot ID: -
• Organism: Bacillus spizizenii strain T30
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1595227..1606372

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BIS30_RS08430 (BIS30_08430)	-	1595362..1596522 (+)	1161	WP_079996665.1	insulinase family protein	-
BIS30_RS08435 (BIS30_08435)	-	1596527..1597810 (+)	1284	WP_003222013.1	pitrilysin family protein	-
BIS30_RS08440 (BIS30_08440)	albG	1597807..1598508 (+)	702	WP_003222015.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
BIS30_RS08445 (BIS30_08445)	-	1598645..1600000 (-)	1356	WP_003222017.1	YncE family protein	-
BIS30_RS08455 (BIS30_08455)	rapF	1600227..1601372 (+)	1146	WP_003222022.1	response regulator aspartate phosphatase RapF	Regulator
BIS30_RS08460 (BIS30_08460)	phrF	1601356..1601475 (+)	120	WP_003222023.1	phosphatase RapF inhibitor PhrF	Regulator
BIS30_RS08465 (BIS30_08465)	speB	1601628..1602500 (-)	873	WP_003222025.1	agmatinase	-
BIS30_RS08470 (BIS30_08470)	speE	1602561..1603391 (-)	831	WP_003222027.1	spermidine synthase	-
BIS30_RS08475 (BIS30_08475)	-	1603593..1605668 (+)	2076	WP_003222029.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45659.13 Da
• Isoelectric Point: 5.5270

>NTDB_id=141782 BIS30_RS08455 WP_003222022.1 1600227..1601372(+) (rapF) [Bacillus spizizenii strain T30]
MTGVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGVLDYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFKKAYSMAKAENQPQLMGRTLYNIGLCKNSQSQYED
AVTYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHAYHSKGMAYSQKAGDSIYLSEFEFLKSLYLSGPDEEAI
QRFFDFLESKMLYADLEDFALDVAKYYHERENFQKASAYFLKVEQVRQLIQGGVRLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=141782 BIS30_RS08455 WP_003222022.1 1600227..1601372(+) (rapF) [Bacillus spizizenii strain T30]
GTGACAGGTGTCATATCTTCTTCTTCCGTCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGAAGAGAAATCAAACAAGAGCTGGATCAAATGGAAGAAGACCAAGATCTTCATTTGTACTATT
CACTGATGGAATTCCGGCACAACCTGATGCTTGAGTACCTTGAACCACTAGAGAAAATGCGGATCGAGGAACAGCCGAGA
TTGTCAGATTTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGAGTCCTTGATTATTACTTTAATTTCTTCAG
AGGCATGTATGAGCTAGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTTAAAAAGGCCGAAAGCAAGTTGATATTTG
TTAAGGATCGAATAGAGAAGGCAGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAGGCATATGAAATATACAAAGAACATGAAGCTTACAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCTACCAATTTCTTAGATTTAAAACAATATGAGGATGCCATCTCACATTTTAAAAAAGCTTACTCTATGGCGAAAG
CTGAGAATCAGCCCCAATTAATGGGGAGAACATTGTACAACATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCGTAACATATTTCAAAAGAGCAATAGCTGTTTTTGAGGAATCTAACATTCTTCCTTCCCTGCCCCAAGCCTATTTTTT
AATTACACAAATTCATTATAAATTGGGAAAAATGGATAAAGCCCATGCATATCATAGTAAGGGAATGGCTTATTCTCAAA
AGGCCGGAGATTCAATCTATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCTGATGAAGAAGCAATT
CAAAGGTTCTTTGATTTCCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTCTTGATGTGGCAAAATATTA
TCATGAACGTGAAAATTTTCAAAAAGCTTCTGCTTATTTCCTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGATTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-207)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	96.063	100	0.961
rapC	Bacillus subtilis subsp. subtilis str. 168	57.632	99.738	0.575