Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | SCVFeb_RS02175 | Genome accession | NZ_CP013477 |
| Coordinates | 455761..456126 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain SCVFeb | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 450761..461126
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SCVFeb_RS02145 (SCVFeb_0420) | pyrR | 451383..451895 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| SCVFeb_RS02150 (SCVFeb_0421) | ruvX | 452007..452441 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| SCVFeb_RS02155 (SCVFeb_0422) | - | 452441..453010 (-) | 570 | WP_003100947.1 | YqgE/AlgH family protein | - |
| SCVFeb_RS02160 (SCVFeb_0423) | - | 453059..453952 (-) | 894 | WP_003162015.1 | energy transducer TonB | - |
| SCVFeb_RS02165 (SCVFeb_0424) | gshB | 454099..455052 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| SCVFeb_RS02170 (SCVFeb_0425) | pilG | 455307..455714 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| SCVFeb_RS02175 (SCVFeb_0426) | pilH | 455761..456126 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| SCVFeb_RS02180 (SCVFeb_0427) | - | 456177..456713 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| SCVFeb_RS02185 (SCVFeb_0428) | pilJ | 456798..458846 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| SCVFeb_RS02190 (SCVFeb_0429) | pilK | 458907..459782 (+) | 876 | WP_003100938.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=140774 SCVFeb_RS02175 WP_003084587.1 455761..456126(+) (pilH) [Pseudomonas aeruginosa strain SCVFeb]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=140774 SCVFeb_RS02175 WP_003084587.1 455761..456126(+) (pilH) [Pseudomonas aeruginosa strain SCVFeb]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |