Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   UC78_RS06465 Genome accession   NZ_CP010906
Coordinates   1269644..1270612 (+) Length   322 a.a.
NCBI ID   WP_002893972.1    Uniprot ID   A0A3H8JWJ4
Organism   Campylobacter jejuni subsp. jejuni strain 35925     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1264644..1275612
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UC78_RS06440 (UC78_1291) cdsA 1265551..1266276 (-) 726 WP_044306196.1 phosphatidate cytidylyltransferase -
  UC78_RS06445 (UC78_1292) - 1266285..1266623 (-) 339 WP_002852397.1 hypothetical protein -
  UC78_RS06450 (UC78_1293) - 1266625..1267932 (-) 1308 WP_044306197.1 NFACT RNA binding domain-containing protein -
  UC78_RS06455 (UC78_1294) mobA 1267994..1268569 (+) 576 WP_002855734.1 molybdenum cofactor guanylyltransferase -
  UC78_RS06460 (UC78_1295) pldA 1268566..1269555 (+) 990 WP_002855844.1 phospholipase A -
  UC78_RS06465 (UC78_1296) ceuB 1269644..1270612 (+) 969 WP_002893972.1 ABC transporter permease Machinery gene
  UC78_RS06470 (UC78_1297) ceuC 1270605..1271543 (+) 939 WP_002854141.1 iron chelate uptake ABC transporter family permease subunit -
  UC78_RS06475 (UC78_1298) ceuD 1271540..1272295 (+) 756 WP_044306198.1 ABC transporter ATP-binding protein -
  UC78_RS06480 (UC78_1299) ceuB 1272308..1273300 (+) 993 WP_044306199.1 enterochelin ABC transporter substrate-binding protein CeuB -
  UC78_RS06490 (UC78_1301) - 1273526..1274080 (-) 555 WP_044259037.1 membrane protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35425.35 Da        Isoelectric Point: 9.6678

>NTDB_id=140765 UC78_RS06465 WP_002893972.1 1269644..1270612(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain 35925]
MFFKHILSLKVLIALLLFFGMISLFIGVISINVKDILNLNSTQLEIITLTRIPRLIAILLTGMSLSICGLIMQQLTQNKF
VSPTTAGTMDCAKFGILISLIFFAGASFFTQAIIASVFALLGSFIFIQILRKIKLKDVIFVPLIGLMFGGIISAITTFFA
YALNYIQNIQGWLQGSMANVMQGNYELLYISLPLFILAYFLAHKITIVGMGEDIALNLGISYNGILFLGLMIVSIITSLV
IVSVGIIPFLGLIIPNLVALYLGDNLRKNLIYIALCGALFLLVCDIISRLVIFPFEMPLSITTGVLGSLIFIFLLLKRKV
YA

Nucleotide


Download         Length: 969 bp        

>NTDB_id=140765 UC78_RS06465 WP_002893972.1 1269644..1270612(+) (ceuB) [Campylobacter jejuni subsp. jejuni strain 35925]
TTGTTTTTTAAGCATATATTGAGTTTAAAAGTGCTTATAGCTTTACTTTTATTCTTTGGAATGATAAGTTTATTTATAGG
AGTTATCAGTATCAATGTAAAAGATATTCTTAATCTTAACTCCACTCAACTAGAAATCATAACCCTCACAAGAATTCCTA
GACTTATAGCAATTTTACTCACGGGAATGAGTCTTAGTATATGCGGGCTTATCATGCAACAACTCACGCAAAATAAATTC
GTTTCTCCAACTACGGCAGGGACTATGGATTGTGCTAAATTTGGCATACTTATTTCTTTAATATTTTTTGCTGGAGCGTC
TTTTTTCACCCAAGCTATCATTGCTTCTGTATTTGCACTTTTGGGTTCTTTTATATTTATCCAAATTTTAAGAAAAATCA
AACTCAAAGATGTGATTTTTGTACCTTTGATAGGCTTGATGTTTGGAGGTATTATTAGTGCTATAACCACTTTTTTTGCC
TATGCTTTAAATTATATACAAAATATCCAAGGTTGGCTACAAGGCAGTATGGCAAATGTTATGCAGGGAAATTATGAATT
GCTCTACATTTCTTTACCACTTTTTATACTTGCTTATTTTTTAGCTCATAAAATCACCATAGTTGGCATGGGCGAAGATA
TAGCTTTAAATCTTGGAATTTCTTATAATGGGATATTATTTTTAGGCTTAATGATTGTAAGCATTATCACTAGCTTAGTG
ATTGTAAGCGTTGGGATTATCCCTTTTTTAGGGCTAATTATCCCAAATTTAGTAGCTCTTTATCTAGGTGATAATCTTAG
AAAAAATCTTATCTATATAGCACTTTGTGGAGCTTTGTTTTTACTTGTTTGCGATATCATTTCAAGACTTGTTATCTTTC
CTTTTGAAATGCCTTTAAGTATCACTACAGGTGTTTTAGGGTCTTTAATCTTTATCTTTCTTTTACTAAAAAGGAAAGTT
TATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(15-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3H8JWJ4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

99.689

100

0.997

Multiple sequence alignment