Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   TO66_RS29480 Genome accession   NZ_CP010892
Coordinates   6462305..6462712 (-) Length   135 a.a.
NCBI ID   WP_044465558.1    Uniprot ID   A0A0D5XT30
Organism   Pseudomonas sp. MRSN 12121 strain MRSN12121     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6457305..6467712
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  TO66_RS29465 (TO66_29455) - 6459185..6461221 (-) 2037 WP_227698254.1 methyl-accepting chemotaxis protein -
  TO66_RS29470 (TO66_29460) - 6461345..6461884 (-) 540 WP_044465557.1 chemotaxis protein CheW -
  TO66_RS29475 (TO66_29465) pilH 6461896..6462261 (-) 366 WP_011336365.1 twitching motility response regulator PilH -
  TO66_RS29480 (TO66_29470) pilG 6462305..6462712 (-) 408 WP_044465558.1 twitching motility response regulator PilG Regulator
  TO66_RS29485 (TO66_29475) gshB 6462949..6463905 (+) 957 WP_044465559.1 glutathione synthase -
  TO66_RS29490 (TO66_29480) - 6464006..6464905 (+) 900 WP_044465560.1 energy transducer TonB -
  TO66_RS29495 (TO66_29485) - 6465092..6465661 (+) 570 WP_044465561.1 YqgE/AlgH family protein -
  TO66_RS29500 (TO66_29490) ruvX 6465661..6466098 (+) 438 WP_044465562.1 Holliday junction resolvase RuvX -
  TO66_RS29505 (TO66_29495) pyrR 6466220..6466726 (+) 507 WP_044465563.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14732.11 Da        Isoelectric Point: 7.3234

>NTDB_id=140680 TO66_RS29480 WP_044465558.1 6462305..6462712(-) (pilG) [Pseudomonas sp. MRSN 12121 strain MRSN12121]
MEQQSSALKVMVIDDSKTIRRTAETLLKNAGCEVITAVDGFEALAKIVDHHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSRDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=140680 TO66_RS29480 WP_044465558.1 6462305..6462712(-) (pilG) [Pseudomonas sp. MRSN 12121 strain MRSN12121]
ATGGAACAGCAATCCAGCGCCCTCAAGGTGATGGTGATCGACGATTCGAAGACGATTCGCCGCACGGCCGAAACGCTGCT
GAAGAATGCCGGGTGCGAAGTCATTACCGCGGTCGACGGTTTCGAGGCCCTGGCCAAGATCGTCGACCATCATCCGGGCA
TCATCTTCGTCGACATCATGATGCCGCGGCTCGATGGCTATCAGACCTGCGCGCTGATCAAGAACAACAGCGCGTTCAAG
TCCACGCCGGTGATTATGCTGTCCTCCAGGGACGGCCTGTTCGACAAGGCCAAGGGTCGCATCGTCGGCTCTGACCAGTT
TTTGACCAAGCCTTTTAGCAAGGAAGAACTGCTGAGCGCGATCAAGGCCCATGTGCCGGGGTTCGCCGCAGTAGAACAAG
CACATTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D5XT30

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

92.593

0.696
  vicR Streptococcus mutans UA159

40.476

93.333

0.378

Multiple sequence alignment