Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   CUGBS08_RS10530 Genome accession   NZ_CP010874
Coordinates   2067302..2068075 (+) Length   257 a.a.
NCBI ID   WP_000456088.1    Uniprot ID   A0AAV3JLJ5
Organism   Streptococcus agalactiae strain CU_GBS_08     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2062302..2073075
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CUGBS08_RS10520 (CUGBS08_02126) rlmH 2065295..2065774 (-) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  CUGBS08_RS10525 (CUGBS08_02127) htrA 2065975..2067204 (+) 1230 WP_000728356.1 S1C family serine protease Regulator
  CUGBS08_RS10530 (CUGBS08_02128) spo0J 2067302..2068075 (+) 774 WP_000456088.1 ParB/RepB/Spo0J family partition protein Regulator
  CUGBS08_RS10535 (CUGBS08_02129) dnaA 2068284..2069645 (+) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  CUGBS08_RS10540 (CUGBS08_02130) dnaN 2069800..2070936 (+) 1137 WP_000581132.1 DNA polymerase III subunit beta -
  CUGBS08_RS10545 (CUGBS08_02131) - 2070994..2071887 (+) 894 WP_000987448.1 diacylglycerol/lipid kinase family protein -
  CUGBS08_RS10550 (CUGBS08_02132) - 2071897..2072094 (+) 198 WP_000285199.1 DUF951 domain-containing protein -
  CUGBS08_RS11110 - 2072260..2072412 (+) 153 WP_079255570.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29237.78 Da        Isoelectric Point: 10.0836

>NTDB_id=140476 CUGBS08_RS10530 WP_000456088.1 2067302..2068075(+) (spo0J) [Streptococcus agalactiae strain CU_GBS_08]
MEYLETININHIAPNPYQPRLEFNTKELEELANSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFANQKELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=140476 CUGBS08_RS10530 WP_000456088.1 2067302..2068075(+) (spo0J) [Streptococcus agalactiae strain CU_GBS_08]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCAACTCTATTAAAATTAATGGGCTTATCCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGCTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCTATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAGAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCGCTAACCAAAAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.255

99.222

0.568

Multiple sequence alignment