Detailed information NTG0139686

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: TE32_RS10615
• Genome accession: NZ_CP010779
• Coordinates: 2218718..2219419 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain XH386
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2213718..2224419

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TE32_RS10585 (TE32_10585)	-	2214024..2214467 (-)	444	WP_001246675.1	SRPBCC family protein	-
TE32_RS10590 (TE32_10590)	tadA	2214537..2215040 (-)	504	WP_047938248.1	tRNA adenosine(34) deaminase TadA	-
TE32_RS10595 (TE32_10595)	-	2215047..2216171 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
TE32_RS10600 (TE32_10600)	ung	2216168..2216881 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
TE32_RS10605 (TE32_10605)	-	2216932..2217528 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
TE32_RS10610 (TE32_10610)	gspK	2217759..2218718 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
TE32_RS10615 (TE32_10615)	xcpW	2218718..2219419 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
TE32_RS10620 (TE32_10620)	xcpV	2219419..2219799 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
TE32_RS10625 (TE32_10625)	-	2219789..2220343 (-)	555	WP_000841373.1	type II secretion system protein	-
TE32_RS10630 (TE32_10630)	-	2220353..2220961 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
TE32_RS10635 (TE32_10635)	-	2220999..2221772 (-)	774	WP_000497298.1	TatD family hydrolase	-
TE32_RS10640 (TE32_10640)	-	2221790..2222131 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
TE32_RS10645 (TE32_10645)	-	2222143..2223123 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
TE32_RS10650 (TE32_10650)	kdsB	2223135..2223896 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=139686 TE32_RS10615 WP_000594589.1 2218718..2219419(-) (xcpW) [Acinetobacter baumannii strain XH386]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=139686 TE32_RS10615 WP_000594589.1 2218718..2219419(-) (xcpW) [Acinetobacter baumannii strain XH386]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996