Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   HSISS4_RS02315 Genome accession   NZ_CP013216
Coordinates   464466..465272 (+) Length   268 a.a.
NCBI ID   WP_021144576.1    Uniprot ID   -
Organism   Streptococcus salivarius strain HSISS4     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 459466..470272
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HSISS4_RS02290 (HSISS4_00409) tpiA 459658..460416 (+) 759 WP_002885895.1 triose-phosphate isomerase -
  HSISS4_RS02295 (HSISS4_00410) recP/tkt 460682..462667 (+) 1986 WP_021144579.1 transketolase Machinery gene
  HSISS4_RS02305 (HSISS4_00411) tmk 462956..463585 (+) 630 WP_021144578.1 dTMP kinase -
  HSISS4_RS02310 (HSISS4_00412) - 463594..464469 (+) 876 WP_021144577.1 DNA polymerase III subunit delta' -
  HSISS4_RS02315 (HSISS4_00413) yaaT 464466..465272 (+) 807 WP_021144576.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  HSISS4_RS02320 (HSISS4_00414) yabA 465259..465579 (+) 321 WP_002887582.1 DNA replication initiation control protein YabA -
  HSISS4_RS02325 (HSISS4_00415) rsmI 465582..466448 (+) 867 WP_021144575.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  HSISS4_RS02330 (HSISS4_00416) - 466586..467821 (+) 1236 WP_021144574.1 ammonium transporter -
  HSISS4_RS02335 (HSISS4_00417) - 467832..468173 (+) 342 WP_021144573.1 P-II family nitrogen regulator -
  HSISS4_RS02340 (HSISS4_00418) - 468265..468921 (+) 657 WP_021144572.1 glucosaminidase domain-containing protein -
  HSISS4_RS02345 (HSISS4_00419) - 468939..469760 (+) 822 WP_021144571.1 Cof-type HAD-IIB family hydrolase -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29789.22 Da        Isoelectric Point: 4.6456

>NTDB_id=139475 HSISS4_RS02315 WP_021144576.1 464466..465272(+) (yaaT) [Streptococcus salivarius strain HSISS4]
MTEVIGIKFEETGAVEYVVPDKNYAKDDFVVVLEKKDKRLAQVVMENTDFPEVSLPTDLNRVEGLAGEKDFARYDENLLK
AEKSMGVVADLIAQNQLDMKVVDIVFPLNNSYVLISFVAEKRVDFRQLLKDLASYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGDEIETKDGMGQVVAIDVI
AGTIKVVFEKGRAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=139475 HSISS4_RS02315 WP_021144576.1 464466..465272(+) (yaaT) [Streptococcus salivarius strain HSISS4]
ATGACAGAAGTCATTGGAATAAAATTTGAAGAAACTGGAGCAGTAGAATACGTTGTTCCTGATAAAAATTACGCCAAAGA
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAACGCCTAGCTCAGGTTGTCATGGAAAACACAGATTTTCCTGAGGTTA
GTTTGCCTACGGATTTGAATCGGGTTGAAGGATTGGCAGGGGAGAAAGATTTCGCTAGATATGATGAAAATCTTTTGAAG
GCTGAAAAGAGTATGGGAGTAGTAGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAGGTGGTTGATATTGTCTTTCC
ACTAAATAACTCTTATGTGTTAATCAGTTTTGTAGCTGAAAAACGGGTAGATTTTCGTCAGTTACTCAAAGACCTGGCTT
CTTACTTTAAGACACGCATTGAGTTGCGTCAAATTTCAAGTCGTGAGGAATCAAAAATCTATGGTGGCTTAGGTCCTTGT
GGCCGGGCACTTTGTTGTTCTAGTTTTTTGGGTGAATTCCCACCAGTATCGATTAAGATGGCTAAAAATCAGAGTTTATC
TTTGAATTCTGGTAAGATGAATGGGGTCTGTGGTCGACTTATGTGTTGTCTCAGTTATGAAGATGACTTTTACCGAGATA
GCAAGGCGAGTTATCCTGACTTGGGTGATGAAATTGAAACCAAGGATGGCATGGGTCAGGTCGTTGCCATTGATGTGATT
GCAGGGACCATTAAGGTTGTATTTGAAAAAGGGCGTGCGCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.322

99.627

0.422