Detailed information NTG0139290

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: SB45_RS16255
• Genome accession: NZ_CP010556
• Coordinates: 3376995..3378158 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain L-H15
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3371995..3383158

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SB45_RS16225 (SB45_16225)	-	3372260..3372679 (-)	420	WP_043867469.1	TIGR03826 family flagellar region protein	-
SB45_RS16230 (SB45_16230)	comFC	3372753..3373442 (-)	690	WP_196769287.1	phosphoribosyltransferase family protein	Machinery gene
SB45_RS16235 (SB45_16235)	-	3373448..3373732 (-)	285	WP_003151389.1	competence protein ComFB	-
SB45_RS16240 (SB45_16240)	comFA	3373790..3375175 (-)	1386	WP_043867470.1	DEAD/DEAH box helicase	Machinery gene
SB45_RS16245 (SB45_16245)	-	3375283..3376131 (-)	849	WP_043867471.1	DegV family protein	-
SB45_RS16250 (SB45_16250)	degU	3376229..3376918 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
SB45_RS16255 (SB45_16255)	degS	3376995..3378158 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
SB45_RS16260 (SB45_16260)	-	3378381..3379028 (+)	648	WP_043867472.1	YigZ family protein	-
SB45_RS16265 (SB45_16265)	-	3379033..3380247 (+)	1215	WP_043867473.1	LCP family protein	-
SB45_RS16270 (SB45_16270)	-	3380337..3381413 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
SB45_RS16275 (SB45_16275)	-	3381546..3382742 (-)	1197	WP_003151381.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=139290 SB45_RS16255 WP_003151385.1 3376995..3378158(-) (degS) [Bacillus velezensis strain L-H15]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=139290 SB45_RS16255 WP_003151385.1 3376995..3378158(-) (degS) [Bacillus velezensis strain L-H15]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GTACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948