Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DW68_RS21395 Genome accession   NZ_CP013124
Coordinates   4615507..4615914 (-) Length   135 a.a.
NCBI ID   WP_003458788.1    Uniprot ID   A0A1H0UVL6
Organism   Ectopseudomonas mendocina S5.2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4610507..4620914
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DW68_RS21375 (DW68_021370) - 4611471..4612331 (-) 861 WP_026041865.1 protein-glutamate O-methyltransferase -
  DW68_RS21380 (DW68_021375) - 4612392..4614428 (-) 2037 WP_013713614.1 methyl-accepting chemotaxis protein -
  DW68_RS21385 (DW68_021380) - 4614509..4615048 (-) 540 WP_017360597.1 chemotaxis protein CheW -
  DW68_RS21390 (DW68_021385) pilH 4615094..4615459 (-) 366 WP_013713612.1 twitching motility response regulator PilH -
  DW68_RS21395 (DW68_021390) pilG 4615507..4615914 (-) 408 WP_003458788.1 twitching motility response regulator PilG Regulator
  DW68_RS21400 (DW68_021395) gshB 4616157..4617113 (+) 957 WP_013713611.1 glutathione synthase -
  DW68_RS21405 (DW68_021400) - 4617202..4618098 (+) 897 WP_013713610.1 energy transducer TonB -
  DW68_RS21410 (DW68_021405) - 4618193..4618762 (+) 570 WP_013713609.1 YqgE/AlgH family protein -
  DW68_RS21415 (DW68_021410) ruvX 4618759..4619196 (+) 438 WP_026041869.1 Holliday junction resolvase RuvX -
  DW68_RS21420 (DW68_021415) pyrR 4619227..4619730 (+) 504 WP_013713607.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  DW68_RS21425 (DW68_021420) - 4619742..4620749 (+) 1008 WP_011920651.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14771.13 Da        Isoelectric Point: 6.7123

>NTDB_id=138872 DW68_RS21395 WP_003458788.1 4615507..4615914(-) (pilG) [Ectopseudomonas mendocina S5.2]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPSIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFTPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=138872 DW68_RS21395 WP_003458788.1 4615507..4615914(-) (pilG) [Ectopseudomonas mendocina S5.2]
ATGGAACAGCATTCCGAGGGTTTGAAAGTGATGGTGATCGACGACTCGAAAACGATTCGTCGCACCGCCGAAACTCTGCT
GAAAAAAGTGGGTTGTGACGTCATCACCGCGGTCGATGGCTTCGATGCCCTGGCCAAGATTGCCGACACTCACCCCAGTA
TCATCTTTGTCGACATCATGATGCCGCGTCTCGATGGGTATCAGACCTGTGCCCTGATCAAGAACAACAGTGCCTTCAAA
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGTCGCATCGTCGGCTCCGATCAATA
CCTGACCAAGCCCTTCAGCAAGGAAGAGCTGCTCGGTGCGATCAAAGCCCACGTGCCGGACTTCACCCCGGTGGAACAAG
CCTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1H0UVL6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4