Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | RC08_RS05035 | Genome accession | NZ_CP010510 |
| Coordinates | 953960..954262 (+) | Length | 100 a.a. |
| NCBI ID | WP_002932767.1 | Uniprot ID | A0A5T1CZF9 |
| Organism | Campylobacter jejuni strain CJ677CC040 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 948960..959262
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC08_RS05010 (RC08_05005) | rpsR | 949322..949582 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| RC08_RS05015 (RC08_05010) | lon | 949643..952018 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| RC08_RS05020 (RC08_05015) | - | 952035..952682 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| RC08_RS05025 (RC08_05020) | fliW | 952843..953232 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| RC08_RS05030 (RC08_05025) | proC | 953232..953963 (+) | 732 | WP_002932769.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| RC08_RS05035 (RC08_05030) | ctsT | 953960..954262 (+) | 303 | WP_002932767.1 | transformation system protein | Machinery gene |
| RC08_RS05040 (RC08_05035) | - | 954259..954921 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| RC08_RS05045 (RC08_05040) | - | 954918..955370 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| RC08_RS05050 (RC08_05045) | hemD | 955367..955996 (-) | 630 | WP_002932761.1 | uroporphyrinogen-III synthase | - |
| RC08_RS05055 (RC08_05050) | thiE | 955974..956606 (-) | 633 | WP_002932757.1 | thiamine phosphate synthase | - |
| RC08_RS05060 (RC08_05055) | thiD | 956596..957408 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RC08_RS05065 (RC08_05060) | - | 957405..958091 (-) | 687 | WP_002932755.1 | 3-methyladenine DNA glycosylase | - |
| RC08_RS05070 (RC08_05065) | - | 958088..958849 (-) | 762 | WP_002932753.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12120.19 Da Isoelectric Point: 6.2957
>NTDB_id=138808 RC08_RS05035 WP_002932767.1 953960..954262(+) (ctsT) [Campylobacter jejuni strain CJ677CC040]
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYAQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=138808 RC08_RS05035 WP_002932767.1 953960..954262(+) (ctsT) [Campylobacter jejuni strain CJ677CC040]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATGCTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |