Detailed information
Bioinformatically predicted
Overview
| Name | CJE0566 | Type | Regulator |
| Locus tag | RC29_RS02655 | Genome accession | NZ_CP010508 |
| Coordinates | 471286..471939 (-) | Length | 217 a.a. |
| NCBI ID | WP_059111151.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain CJ677CC523 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 458236..487519 | 471286..471939 | within | 0 |
Gene organization within MGE regions
Location: 458236..487519
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC29_RS02535 (RC29_02545) | - | 458236..459438 (+) | 1203 | WP_052844203.1 | site-specific integrase | - |
| RC29_RS02540 (RC29_02550) | - | 459435..459605 (-) | 171 | WP_002864902.1 | helix-turn-helix domain-containing protein | - |
| RC29_RS02545 (RC29_02555) | - | 459598..460140 (-) | 543 | WP_059111110.1 | pentapeptide repeat-containing protein | - |
| RC29_RS02550 (RC29_02560) | - | 460128..460328 (-) | 201 | WP_059111111.1 | hypothetical protein | - |
| RC29_RS02555 (RC29_02565) | - | 460369..460788 (-) | 420 | WP_059111112.1 | YopX family protein | - |
| RC29_RS02560 (RC29_02570) | - | 460792..461490 (-) | 699 | WP_059111113.1 | antA/AntB antirepressor family protein | - |
| RC29_RS02565 (RC29_02575) | - | 461664..462059 (-) | 396 | WP_059111114.1 | hypothetical protein | - |
| RC29_RS02570 (RC29_02580) | - | 462072..462344 (-) | 273 | WP_059111115.1 | hypothetical protein | - |
| RC29_RS02575 (RC29_02585) | - | 462337..462660 (-) | 324 | WP_059111116.1 | hypothetical protein | - |
| RC29_RS02580 (RC29_02590) | - | 462724..463623 (-) | 900 | WP_171831519.1 | hypothetical protein | - |
| RC29_RS02585 (RC29_02595) | - | 463657..464409 (-) | 753 | WP_059111117.1 | site-specific DNA-methyltransferase | - |
| RC29_RS02590 (RC29_02600) | - | 464411..464668 (-) | 258 | WP_059111150.1 | hypothetical protein | - |
| RC29_RS02595 (RC29_02605) | - | 464649..465347 (-) | 699 | WP_059111118.1 | hypothetical protein | - |
| RC29_RS02600 (RC29_02610) | - | 465347..466081 (-) | 735 | WP_059111119.1 | hypothetical protein | - |
| RC29_RS02605 (RC29_02615) | - | 466083..466937 (-) | 855 | WP_048818565.1 | lambda-exonuclease family protein | - |
| RC29_RS02610 (RC29_02620) | - | 466927..467670 (-) | 744 | WP_048818566.1 | phage regulatory protein/antirepressor Ant | - |
| RC29_RS02615 (RC29_02625) | - | 467667..467849 (-) | 183 | WP_002900944.1 | hypothetical protein | - |
| RC29_RS02620 (RC29_02630) | - | 467994..468209 (+) | 216 | WP_048818567.1 | hypothetical protein | - |
| RC29_RS09140 | - | 468179..468343 (-) | 165 | WP_194717242.1 | hypothetical protein | - |
| RC29_RS02625 (RC29_02635) | - | 468340..468594 (-) | 255 | WP_048818568.1 | hypothetical protein | - |
| RC29_RS02630 (RC29_02640) | - | 468585..468854 (-) | 270 | WP_002783984.1 | hypothetical protein | - |
| RC29_RS02635 (RC29_02645) | - | 469211..469483 (-) | 273 | WP_059111120.1 | hypothetical protein | - |
| RC29_RS02640 (RC29_02650) | - | 469663..470433 (+) | 771 | WP_059111121.1 | sel1 repeat family protein | - |
| RC29_RS02645 (RC29_02655) | - | 470437..470712 (-) | 276 | WP_004296768.1 | hypothetical protein | - |
| RC29_RS02650 (RC29_02660) | - | 470699..471205 (-) | 507 | WP_059111122.1 | Panacea domain-containing protein | - |
| RC29_RS02655 (RC29_02665) | CJE0566 | 471286..471939 (-) | 654 | WP_059111151.1 | DNA/RNA non-specific endonuclease | Regulator |
| RC29_RS02660 (RC29_02670) | - | 471959..472732 (-) | 774 | WP_002929400.1 | hypothetical protein | - |
| RC29_RS02665 (RC29_02675) | - | 472729..473460 (-) | 732 | WP_002929403.1 | S24 family peptidase | - |
| RC29_RS02670 (RC29_02680) | - | 473601..473816 (+) | 216 | WP_002925661.1 | hypothetical protein | - |
| RC29_RS08955 | - | 473912..474211 (+) | 300 | WP_002861657.1 | hypothetical protein | - |
| RC29_RS02680 (RC29_02690) | - | 474208..475209 (+) | 1002 | WP_059111123.1 | hypothetical protein | - |
| RC29_RS02685 (RC29_02695) | - | 475220..475870 (+) | 651 | WP_002861659.1 | hypothetical protein | - |
| RC29_RS02690 (RC29_02700) | - | 475888..476268 (+) | 381 | WP_002861660.1 | hypothetical protein | - |
| RC29_RS02695 (RC29_02705) | - | 476268..476654 (+) | 387 | WP_002826748.1 | terminase small subunit | - |
| RC29_RS02700 (RC29_02710) | - | 476651..477943 (+) | 1293 | WP_059111124.1 | terminase | - |
| RC29_RS02705 (RC29_02715) | - | 477933..478205 (+) | 273 | WP_057031814.1 | hypothetical protein | - |
| RC29_RS02710 (RC29_02720) | - | 478186..479724 (+) | 1539 | WP_002875071.1 | hypothetical protein | - |
| RC29_RS02715 (RC29_02725) | - | 479717..479920 (+) | 204 | WP_002875072.1 | hypothetical protein | - |
| RC29_RS02720 (RC29_02730) | - | 479910..480557 (+) | 648 | WP_059111125.1 | hypothetical protein | - |
| RC29_RS02725 (RC29_02735) | - | 480568..480948 (+) | 381 | WP_059111126.1 | hypothetical protein | - |
| RC29_RS02730 (RC29_02740) | - | 481213..482427 (+) | 1215 | WP_059111127.1 | hypothetical protein | - |
| RC29_RS09145 (RC29_02745) | - | 482424..486104 (+) | 3681 | WP_059111128.1 | PBECR2 nuclease fold domain-containing protein | - |
| RC29_RS02740 (RC29_02750) | - | 486485..487519 (+) | 1035 | WP_002875076.1 | DUF5309 family protein | - |
Sequence
Protein
Download Length: 217 a.a. Molecular weight: 25586.14 Da Isoelectric Point: 9.8271
>NTDB_id=138751 RC29_RS02655 WP_059111151.1 471286..471939(-) (CJE0566) [Campylobacter jejuni strain CJ677CC523]
MKKLILLPLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYKLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDSNPQRIKNQIAIPNSYTKILKGDNFKECYQVPNHEVEDENIKKYKVNCDKI
MKKLILLPLLSTLAFADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYKLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDSNPQRIKNQIAIPNSYTKILKGDNFKECYQVPNHEVEDENIKKYKVNCDKI
Nucleotide
Download Length: 654 bp
>NTDB_id=138751 RC29_RS02655 WP_059111151.1 471286..471939(-) (CJE0566) [Campylobacter jejuni strain CJ677CC523]
GTGAAAAAACTCATACTTTTGCCATTGTTATCCACTCTAGCTTTTGCTGATTACACACAATATAAACCGAGTGAAGATTT
TGCAAAGTATTTTACTAAACAAAACTGCTCTCAAGTTTTAGATAAGTTTTATTATCTAAATTGTTATGATTATAATTATA
AAGGCACTAAAGCTGTAGCTTATAAATTAGAAGCGGAAAATTTAAAAGGCGAACAAATTAAAAAACGCCCACGATTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCCCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AGATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAACTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAGCAACCCTCAAAGAATAAAAAATCAAATTGCTATTCCAAACTCTTACACTAAGATTTTAAA
AGGCGATAATTTTAAAGAATGTTACCAAGTGCCAAATCATGAAGTAGAAGATGAGAATATAAAAAAATATAAGGTTAATT
GTGATAAAATATAA
GTGAAAAAACTCATACTTTTGCCATTGTTATCCACTCTAGCTTTTGCTGATTACACACAATATAAACCGAGTGAAGATTT
TGCAAAGTATTTTACTAAACAAAACTGCTCTCAAGTTTTAGATAAGTTTTATTATCTAAATTGTTATGATTATAATTATA
AAGGCACTAAAGCTGTAGCTTATAAATTAGAAGCGGAAAATTTAAAAGGCGAACAAATTAAAAAACGCCCACGATTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCCCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AGATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAACTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAGCAACCCTCAAAGAATAAAAAATCAAATTGCTATTCCAAACTCTTACACTAAGATTTTAAA
AGGCGATAATTTTAAAGAATGTTACCAAGTGCCAAATCATGAAGTAGAAGATGAGAATATAAAAAAATATAAGGTTAATT
GTGATAAAATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| CJE0566 | Campylobacter jejuni RM1221 |
93.088 |
100 |
0.931 |
| CJE1441 | Campylobacter jejuni RM1221 |
92.093 |
99.078 |
0.912 |