Detailed information    

insolico Bioinformatically predicted

Overview


Name   CJE0566   Type   Regulator
Locus tag   RC26_RS08295 Genome accession   NZ_CP010501
Coordinates   1569138..1569788 (+) Length   216 a.a.
NCBI ID   WP_002807507.1    Uniprot ID   A0A5Z1IG29
Organism   Campylobacter jejuni strain CJ677CC520     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1564138..1574788
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RC26_RS08280 (RC26_08255) - 1565369..1565761 (-) 393 WP_032599840.1 hypothetical protein -
  RC26_RS09275 - 1565985..1566155 (+) 171 WP_002807115.1 hypothetical protein -
  RC26_RS08285 (RC26_08260) - 1566892..1567083 (-) 192 WP_002779581.1 hypothetical protein -
  RC26_RS08290 (RC26_08265) - 1567076..1568533 (-) 1458 WP_002807506.1 DNA methylase -
  RC26_RS08295 (RC26_08270) CJE0566 1569138..1569788 (+) 651 WP_002807507.1 DNA/RNA non-specific endonuclease Regulator
  RC26_RS08300 (RC26_08275) - 1570428..1570841 (-) 414 WP_002821960.1 hypothetical protein -
  RC26_RS08305 (RC26_08280) - 1571391..1571705 (+) 315 WP_002807232.1 hypothetical protein -
  RC26_RS09280 - 1571717..1571860 (+) 144 WP_002807233.1 hypothetical protein -
  RC26_RS08310 (RC26_08285) - 1572015..1572614 (-) 600 WP_002807234.1 RloB domain-containing protein -
  RC26_RS08315 (RC26_08290) - 1572607..1573749 (-) 1143 WP_002807240.1 AAA family ATPase -

Sequence


Protein


Download         Length: 216 a.a.        Molecular weight: 25454.97 Da        Isoelectric Point: 9.8978

>NTDB_id=138585 RC26_RS08295 WP_002807507.1 1569138..1569788(+) (CJE0566) [Campylobacter jejuni strain CJ677CC520]
MKKLIILPLLATLALADYTQYKPSEDFAKYFTKQSCSQVLDKFYYLNCYDYNLKGTKAVAYRLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYRNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYIKILKGENFKECYQVPNHEVENENIRSYQVKCQN

Nucleotide


Download         Length: 651 bp        

>NTDB_id=138585 RC26_RS08295 WP_002807507.1 1569138..1569788(+) (CJE0566) [Campylobacter jejuni strain CJ677CC520]
ATGAAAAAACTTATAATCTTACCACTGCTAGCAACTCTAGCCTTAGCTGATTATACACAATACAAGCCAAGCGAAGATTT
TGCTAAGTATTTTACTAAGCAAAGTTGTTCACAAGTTTTAGATAAATTCTATTATCTAAATTGTTATGATTATAATCTAA
AAGGTACAAAAGCTGTAGCTTATAGATTGGAAGCGGAAAATTTAAAAGGCGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATTCCTAAAAAATATCGTACTACATGGAGTGATTATAGAAACAGTGGTTATGATAGAGGACACACTCT
TTCTAATGCTTCTATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCACAAAATCCAC
AAATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTGAAGCTTGGAAGTTTAGAAGTTTTA
AATTTAGTTAATTATGACAATAATCCACAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTATATTAAAATCTTAAA
AGGTGAGAATTTTAAAGAATGTTATCAAGTGCCAAACCATGAAGTGGAAAACGAGAATATAAGATCTTATCAGGTTAAAT
GTCAAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5Z1IG29

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

93.458

99.074

0.926

  CJE1441 Campylobacter jejuni RM1221

92.13

100

0.921


Multiple sequence alignment