Detailed information
Bioinformatically predicted
Overview
| Name | CJE0566 | Type | Regulator |
| Locus tag | RC44_RS04550 | Genome accession | NZ_CP010495 |
| Coordinates | 843813..844472 (-) | Length | 219 a.a. |
| NCBI ID | WP_052803898.1 | Uniprot ID | A0A5Y8X2B9 |
| Organism | Campylobacter jejuni strain CJ677CC538 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 827071..860255 | 843813..844472 | within | 0 |
Gene organization within MGE regions
Location: 827071..860255
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC44_RS04425 (RC44_04430) | - | 827071..828411 (-) | 1341 | WP_048818618.1 | sodium-dependent transporter | - |
| RC44_RS04430 (RC44_04435) | - | 828424..829758 (-) | 1335 | WP_002853878.1 | sodium-dependent transporter | - |
| RC44_RS04435 (RC44_04440) | atpE | 829992..830330 (+) | 339 | WP_002853683.1 | F0F1 ATP synthase subunit C | - |
| RC44_RS04445 (RC44_04450) | - | 830650..831849 (+) | 1200 | WP_059119406.1 | site-specific integrase | - |
| RC44_RS09430 | - | 831776..832015 (-) | 240 | WP_002861629.1 | helix-turn-helix domain-containing protein | - |
| RC44_RS04450 (RC44_04455) | - | 832008..832550 (-) | 543 | WP_059119407.1 | pentapeptide repeat-containing protein | - |
| RC44_RS04455 (RC44_04460) | - | 832538..832738 (-) | 201 | WP_059119408.1 | hypothetical protein | - |
| RC44_RS04460 (RC44_04465) | - | 832779..833198 (-) | 420 | WP_059119409.1 | YopX family protein | - |
| RC44_RS04465 (RC44_04470) | - | 833201..833878 (-) | 678 | WP_059119410.1 | hypothetical protein | - |
| RC44_RS04470 (RC44_04475) | - | 834023..834253 (-) | 231 | WP_038406469.1 | helix-turn-helix transcriptional regulator | - |
| RC44_RS04475 (RC44_04480) | - | 834255..835025 (-) | 771 | WP_059119411.1 | hypothetical protein | - |
| RC44_RS04480 (RC44_04485) | - | 835181..835414 (-) | 234 | WP_059119412.1 | hypothetical protein | - |
| RC44_RS04485 (RC44_04490) | - | 835424..835717 (-) | 294 | WP_059119413.1 | hypothetical protein | - |
| RC44_RS04490 (RC44_04495) | - | 835753..836505 (-) | 753 | WP_059119414.1 | site-specific DNA-methyltransferase | - |
| RC44_RS04495 (RC44_04500) | - | 836507..836764 (-) | 258 | WP_059111150.1 | hypothetical protein | - |
| RC44_RS04500 (RC44_04505) | - | 836745..837440 (-) | 696 | WP_059119415.1 | hypothetical protein | - |
| RC44_RS04505 (RC44_04510) | - | 837440..838177 (-) | 738 | WP_002873576.1 | hypothetical protein | - |
| RC44_RS04510 (RC44_04515) | - | 838179..839033 (-) | 855 | WP_059119416.1 | lambda-exonuclease family protein | - |
| RC44_RS04515 (RC44_04520) | - | 839023..839766 (-) | 744 | WP_002825845.1 | phage regulatory protein/antirepressor Ant | - |
| RC44_RS09235 | - | 839768..839917 (-) | 150 | WP_165696652.1 | hypothetical protein | - |
| RC44_RS04520 (RC44_04525) | - | 839914..840168 (-) | 255 | WP_002795984.1 | hypothetical protein | - |
| RC44_RS04525 (RC44_04530) | - | 840159..840428 (-) | 270 | WP_022552238.1 | hypothetical protein | - |
| RC44_RS04530 (RC44_04535) | - | 840786..841058 (-) | 273 | WP_011049699.1 | hypothetical protein | - |
| RC44_RS04535 (RC44_04540) | - | 841238..842008 (+) | 771 | WP_059119417.1 | SEL1-like repeat protein | - |
| RC44_RS04540 (RC44_04545) | - | 842048..842503 (-) | 456 | WP_052775415.1 | hypothetical protein | - |
| RC44_RS04545 (RC44_04550) | - | 842490..843713 (-) | 1224 | WP_059119418.1 | AAA family ATPase | - |
| RC44_RS04550 (RC44_04555) | CJE0566 | 843813..844472 (-) | 660 | WP_052803898.1 | DNA/RNA non-specific endonuclease | Regulator |
| RC44_RS04555 (RC44_04560) | - | 844492..845265 (-) | 774 | WP_059119419.1 | hypothetical protein | - |
| RC44_RS04560 (RC44_04565) | - | 845262..845996 (-) | 735 | WP_011049707.1 | S24 family peptidase | - |
| RC44_RS09005 | - | 846108..846332 (+) | 225 | WP_011049708.1 | hypothetical protein | - |
| RC44_RS04565 (RC44_04570) | - | 846488..846853 (-) | 366 | WP_002874369.1 | hypothetical protein | - |
| RC44_RS04570 (RC44_04575) | - | 846896..847897 (+) | 1002 | WP_059119420.1 | hypothetical protein | - |
| RC44_RS04575 (RC44_04580) | - | 847908..848558 (+) | 651 | WP_059119421.1 | hypothetical protein | - |
| RC44_RS04580 (RC44_04585) | - | 848576..848956 (+) | 381 | WP_044778791.1 | crossover junction endodeoxyribonuclease RusA | - |
| RC44_RS04585 (RC44_04590) | - | 848956..849342 (+) | 387 | WP_059119422.1 | terminase small subunit | - |
| RC44_RS04590 (RC44_04595) | - | 849339..850631 (+) | 1293 | WP_002875069.1 | terminase | - |
| RC44_RS04595 (RC44_04600) | - | 850621..850893 (+) | 273 | WP_002781524.1 | hypothetical protein | - |
| RC44_RS04600 (RC44_04605) | - | 850874..852412 (+) | 1539 | WP_059119423.1 | hypothetical protein | - |
| RC44_RS04605 (RC44_04610) | - | 852405..852608 (+) | 204 | WP_000931940.1 | hypothetical protein | - |
| RC44_RS04610 (RC44_04615) | - | 852598..853245 (+) | 648 | WP_059119424.1 | hypothetical protein | - |
| RC44_RS04615 (RC44_04620) | - | 853256..853636 (+) | 381 | WP_059119425.1 | hypothetical protein | - |
| RC44_RS04620 (RC44_04625) | - | 853901..855115 (+) | 1215 | WP_059119426.1 | hypothetical protein | - |
| RC44_RS04625 (RC44_04630) | - | 855112..858813 (+) | 3702 | WP_059119427.1 | PBECR2 nuclease fold domain-containing protein | - |
| RC44_RS04630 (RC44_04635) | - | 859221..860255 (+) | 1035 | WP_059119428.1 | DUF5309 family protein | - |
Sequence
Protein
Download Length: 219 a.a. Molecular weight: 25829.41 Da Isoelectric Point: 9.8476
>NTDB_id=138410 RC44_RS04550 WP_052803898.1 843813..844472(-) (CJE0566) [Campylobacter jejuni strain CJ677CC538]
MKKLILLPLLSTLALADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGEIEVL
NLVNYDNNPQRIRNQIAIPSSYTKILKGDNFKECYQVPNHEVEDESIRKYKVNCGKIHI
MKKLILLPLLSTLALADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTISNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGEIEVL
NLVNYDNNPQRIRNQIAIPSSYTKILKGDNFKECYQVPNHEVEDESIRKYKVNCGKIHI
Nucleotide
Download Length: 660 bp
>NTDB_id=138410 RC44_RS04550 WP_052803898.1 843813..844472(-) (CJE0566) [Campylobacter jejuni strain CJ677CC538]
GTGAAAAAACTCATACTTTTACCATTGTTATCCACTCTAGCTTTAGCTGATTATACACAATACAAGCCAAGCGAAGATTT
TGCTAAGTATTTTACTAAACAAAACTGCTCACAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATTATA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGTGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACCCAAGCTCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AGATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAGAAATTGAAGTTTTA
AATTTGGTTAATTATGACAATAATCCACAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTACACTAAGATTTTAAA
AGGTGATAATTTTAAAGAATGTTACCAAGTGCCAAATCATGAAGTAGAAGATGAGAGTATAAGAAAATATAAGGTTAATT
GTGGTAAAATTCATATTTAA
GTGAAAAAACTCATACTTTTACCATTGTTATCCACTCTAGCTTTAGCTGATTATACACAATACAAGCCAAGCGAAGATTT
TGCTAAGTATTTTACTAAACAAAACTGCTCACAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATTATA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGTGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCATACTAT
TTCTAATGCTTCAATGAGAAAAACAACCCAAGCTCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AGATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAGAAATTGAAGTTTTA
AATTTGGTTAATTATGACAATAATCCACAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTACACTAAGATTTTAAA
AGGTGATAATTTTAAAGAATGTTACCAAGTGCCAAATCATGAAGTAGAAGATGAGAGTATAAGAAAATATAAGGTTAATT
GTGGTAAAATTCATATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| CJE0566 | Campylobacter jejuni RM1221 |
92.627 |
99.087 |
0.918 |
| CJE1441 | Campylobacter jejuni RM1221 |
92.056 |
97.717 |
0.9 |